Basic Information:

  VIRBase ID:  

VHID00358395

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART15:  MIMAT0003713          VPS26C:  NM_001331018     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART15	VPS26C
miRBase Accession/Entrez ID	MIMAT0003713	10311
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DCRA//DSCR3//DSCRA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	VPS26C	chr21:38596709(-) A-I      3'UTR chr21:38602418(-) A-I      intronic chr21:38614028(-) A-I      intronic chr21:38613931(-) A-I      intronic chr21:38596714(-) A-I      3'UTR chr21:38596748(-) A-I      3'UTR chr21:38596747(-) A-I      3'UTR chr21:38614040(-) A-I      intronic chr21:38602440(-) A-I      intronic chr21:38614037(-) A-I      intronic chr21:38601076(-) A-I      intronic chr21:38620269(-) A-I      intronic chr21:38629364(-) A-I      intronic chr21:38629376(-) A-I      intronic chr21:38629381(-) A-I      intronic chr21:38629389(-) A-I      intronic chr21:38632761(-) A-I      intronic chr21:38632762(-) A-I      intronic chr21:38620219(-) A-I      intronic chr21:38620221(-) A-I      intronic chr21:38620253(-) A-I      intronic chr21:38600413(-) A-I      intronic chr21:38601111(-) A-I      intronic chr21:38602219(-) A-I      intronic chr21:38602276(-) A-I      intronic chr21:38602277(-) A-I      intronic chr21:38602278(-) A-I      intronic chr21:38602283(-) A-I      intronic chr21:38602293(-) A-I      intronic chr21:38602300(-) A-I      intronic chr21:38602349(-) A-I      intronic chr21:38602351(-) A-I      intronic chr21:38602364(-) A-I      intronic chr21:38602386(-) A-I      intronic chr21:38602411(-) A-I      intronic chr21:38602414(-) A-I      intronic chr21:38602441(-) A-I      intronic chr21:38620289(-) A-I      intronic chr21:38601186(-) A-I      intronic chr21:38602405(-) A-I      intronic chr21:38632778(-) A-I      intronic chr21:38619116(-) A-I      intronic chr21:38612698(-) A-I      intronic chr21:38614047(-) A-I      intronic chr21:38614001(-) A-I      intronic chr21:38601145(-) A-I      intronic chr21:38619335(-) A-I      intronic chr21:38628340(-) A-I      intronic chr21:38596590(-) A-I      3'UTR chr21:38596661(-) A-I      3'UTR chr21:38596589(-) A-I      3'UTR chr21:38601221(-) A-I      intronic chr21:38601212(-) A-I      intronic chr21:38614011(-) A-I      intronic chr21:38628410(-) A-I      intronic chr21:38601287(-) A-I      intronic chr21:38601116(-) A-I      intronic chr21:38602400(-) A-I      intronic chr21:38620209(-) A-I      intronic chr21:38601251(-) A-I      intronic chr21:38619278(-) A-I      intronic chr21:38601210(-) A-I      intronic chr21:38601315(-) A-I      intronic chr21:38602401(-) A-I      intronic chr21:38601167(-) A-I      intronic chr21:38602454(-) A-I      intronic chr21:38629234(-) A-I      intronic chr21:38614023(-) A-I      intronic chr21:38628261(-) A-I      intronic chr21:38602371(-) A-I      intronic chr21:38614082(-) A-I      intronic chr21:38601128(-) A-I      intronic chr21:38601115(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	VPS26C	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART15
Interactor2: VPS26C

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg