Basic Information:

  VIRBase ID:  

VHID00358272

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART15:  MIMAT0003713          DNAJC6:  NM_014787     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART15	DNAJC6
miRBase Accession/Entrez ID	MIMAT0003713	9829
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DJC6//PARK19

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DNAJC6	chr1:65736501(+) A-I      intronic chr1:65735041(+) A-I      intronic chr1:65735039(+) A-I      intronic chr1:65735033(+) A-I      intronic chr1:65735031(+) A-I      intronic chr1:65771937(+) A-I      intronic chr1:65771977(+) A-I      intronic chr1:65771998(+) A-I      intronic chr1:65771860(+) A-I      intronic chr1:65847138(+) A-I      intronic chr1:65847184(+) A-I      intronic chr1:65847197(+) A-I      intronic chr1:65734996(+) A-I      intronic chr1:65735016(+) A-I      intronic chr1:65732709(+) A-I      intronic chr1:65738497(+) A-I      intronic chr1:65737364(+) A-I      intronic chr1:65736462(+) A-I      intronic chr1:65736381(+) A-I      intronic chr1:65737433(+) A-I      intronic chr1:65846782(+) A-I      intronic chr1:65737533(+) A-I      intronic chr1:65847112(+) A-I      intronic chr1:65777129(+) A-I      intronic chr1:65847044(+) A-I      intronic chr1:65739200(+) A-I      intronic chr1:65737477(+) A-I      intronic chr1:65737442(+) A-I      intronic chr1:65847045(+) A-I      intronic chr1:65734845(+) A-I      intronic chr1:65777091(+) A-I      intronic chr1:65736426(+) A-I      intronic chr1:65790061(+) A-I      intronic chr1:65734790(+) A-I      intronic chr1:65736401(+) A-I      intronic chr1:65732719(+) A-I      intronic chr1:65739162(+) A-I      intronic chr1:65737432(+) A-I      intronic chr1:65846973(+) A-I      intronic chr1:65823741(+) A-I      intronic chr1:65847153(+) A-I      intronic chr1:65741694(+) A-I      intronic chr1:65739267(+) A-I      intronic chr1:65847173(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DNAJC6	chr1:65720927-65720928(+) Tm intron       - chr1:65855275-65855276(+) m6A CDS       22608085 chr1:65858146-65858147(+) m6A CDS       24284625//25456834//22575960//22608085 chr1:65858192-65858193(+) m6A CDS       24284625//25456834//22575960//22608085 chr1:65858308-65858309(+) m6A CDS       24284625//25456834//22608085 chr1:65858381-65858382(+) m6A CDS       24284625//22608085 chr1:65858435-65858436(+) m6A CDS       25456834 chr1:65858471-65858472(+) m6A CDS       25456834 chr1:65860614-65860615(+) m6A CDS       24981863 chr1:65867522-65867523(+) m6A CDS       - chr1:65867529-65867530(+) m6A CDS       - chr1:65867556-65867557(+) m6A CDS       - chr1:65871574-65871575(+) m6A CDS       - chr1:65874406-65874407(+) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DNAJC6	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART15
Interactor2: DNAJC6

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg