Basic Information:

  VIRBase ID:  

VHID00356713

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART15:  MIMAT0003713          ASPH:  NM_001164752     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART15	ASPH
miRBase Accession/Entrez ID	MIMAT0003713	444
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AAH//BAH//CASQ2BP1//FDLAB//HAAH//JCTN//junctin

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ASPH	chr8:62427156(-) A-I      intronic chr8:62427168(-) A-I      intronic chr8:62427266(-) A-I      intronic chr8:62435942(-) A-I      intronic chr8:62436013(-) A-I      intronic chr8:62436095(-) A-I      intronic chr8:62436122(-) A-I      intronic chr8:62436157(-) A-I      intronic chr8:62436478(-) A-I      intronic chr8:62450192(-) A-I      intronic chr8:62453395(-) A-I      intronic chr8:62467958(-) A-I      intronic chr8:62467981(-) A-I      intronic chr8:62467991(-) A-I      intronic chr8:62497314(-) A-I      intronic chr8:62497340(-) A-I      intronic chr8:62497341(-) A-I      intronic chr8:62513952(-) A-I      intronic chr8:62513978(-) A-I      intronic chr8:62527155(-) A-I      intronic chr8:62527159(-) A-I      intronic chr8:62527165(-) A-I      intronic chr8:62527338(-) A-I      intronic chr8:62530224(-) A-I      intronic chr8:62530231(-) A-I      intronic chr8:62530319(-) A-I      intronic chr8:62530392(-) A-I      intronic chr8:62530406(-) A-I      intronic chr8:62615020(-) A-I      intronic chr8:62615014(-) A-I      intronic chr8:62615008(-) A-I      intronic chr8:62614968(-) A-I      intronic chr8:62497349(-) A-I      intronic chr8:62497287(-) A-I      intronic chr8:62436043(-) A-I      intronic chr8:62436023(-) A-I      intronic chr8:62427324(-) A-I      intronic chr8:62572965(-) A-I      intronic chr8:62572971(-) A-I      intronic chr8:62572973(-) A-I      intronic chr8:62572976(-) A-I      intronic chr8:62572977(-) A-I      intronic chr8:62572978(-) A-I      intronic chr8:62530370(-) A-I      intronic chr8:62530268(-) A-I      intronic chr8:62420847(-) A-I      intronic chr8:62420854(-) A-I      intronic chr8:62598397(-) A-I      intronic chr8:62435986(-) A-I      intronic chr8:62474447(-) A-I      intronic chr8:62436012(-) A-I      intronic chr8:62558661(-) A-I      intronic chr8:62525061(-) A-I      intronic chr8:62436431(-) A-I      intronic chr8:62436039(-) A-I      intronic chr8:62527324(-) A-I      intronic chr8:62427400(-) A-I      intronic chr8:62497357(-) A-I      intronic chr8:62530325(-) A-I      intronic chr8:62450011(-) A-I      intronic chr8:62436458(-) A-I      intronic chr8:62420712(-) A-I      intronic chr8:62427320(-) A-I      intronic chr8:62427146(-) A-I      intronic chr8:62436580(-) A-I      intronic chr8:62497319(-) A-I      intronic chr8:62450021(-) A-I      intronic chr8:62497311(-) A-I      intronic chr8:62525018(-) A-I      intronic chr8:62497267(-) A-I      intronic chr8:62436094(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ASPH	chr8:62436580(-) A-G intron -    22484847 chr8:62453836(-) A-G intron -    22484847 chr8:62509836(-) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ASPH	chr8:62413528-62413529(-) m6A 3'UTR       27773535 chr8:62414052-62414053(-) m6A 3'UTR       26404942 chr8:62414457-62414458(-) m6A 3'UTR       26404942 chr8:62414517-62414518(-) m6A 3'UTR       26404942 chr8:62414748-62414749(-) m6A 3'UTR       26404942 chr8:62414790-62414791(-) m6A 3'UTR       26404942 chr8:62414984-62414985(-) m6A 3'UTR       26404942 chr8:62415072-62415073(-) m6A 3'UTR       26404942 chr8:62415308-62415309(-) m6A 3'UTR       26404942 chr8:62415724-62415725(-) m6A 3'UTR       24284625 chr8:62415766-62415767(-) m6A 3'UTR       24284625 chr8:62415832-62415833(-) m6A 3'UTR       24284625//25456834//24981863//26404942 chr8:62415892-62415893(-) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960 chr8:62415956-62415957(-) m6A CDS       24284625//24981863//26404942 chr8:62430090-62430091(-) m6A CDS//exon       27773535 chr8:62430161-62430162(-) m6A CDS//exon       24284625//26404942//27773535 chr8:62430192-62430193(-) m6A CDS//exon       24284625//24981863//26404942//27773535 chr8:62430593-62430594(-) m6A CDS//exon       24981863//26404942//27773535 chr8:62430613-62430614(-) m6A CDS//exon       24981863//26404942//27773535 chr8:62430643-62430644(-) m6A CDS//exon       24981863//27773535//27371828 chr8:62438564-62438565(-) m6A CDS//exon       24981863//27773535 chr8:62438582-62438583(-) m6A CDS//exon       24981863//27773535 chr8:62438657-62438658(-) m6A CDS       24981863//27773535 chr8:62460664-62460665(-) m6A CDS       24981863//26404942 chr8:62460686-62460687(-) m6A CDS       24981863//26404942 chr8:62460731-62460732(-) m6A CDS       24981863//26404942 chr8:62465596-62465597(-) m6A CDS       24981863//26404942 chr8:62479776-62479777(-) m6A CDS       26404942 chr8:62479816-62479817(-) m6A CDS       26404942//27773535 chr8:62489304-62489305(-) m6A exon//intron       24981863//27773535 chr8:62489319-62489320(-) m6A exon//intron       24981863//27773535 chr8:62489381-62489382(-) m6A CDS//exon       24981863//27773535 chr8:62495562-62495563(-) m6A exon//intron       24981863//27773535 chr8:62495575-62495576(-) m6A exon//intron       24981863//27773535 chr8:62496045-62496046(-) m6A exon//intron       24981863 chr8:62496514-62496515(-) m6A CDS//exon       24981863//27773535 chr8:62496532-62496533(-) m6A CDS//exon       24981863//27773535 chr8:62496546-62496547(-) m6A CDS//exon       24981863//27773535 chr8:62496568-62496569(-) m6A CDS//exon       24981863//27773535 chr8:62519045-62519046(-) m6A 3'UTR//intron       24981863//27773535 chr8:62519115-62519116(-) m6A 3'UTR//intron       24981863//27773535 chr8:62519318-62519319(-) m6A 3'UTR//intron       27773535 chr8:62519490-62519491(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr8:62519617-62519618(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr8:62519633-62519634(-) m6A 3'UTR//intron       24981863//27773535 chr8:62519640-62519641(-) m6A 3'UTR//intron       24981863//27773535 chr8:62519778-62519779(-) m6A 3'UTR//intron       24981863//27773535 chr8:62519829-62519830(-) m6A CDS//intron       24981863//27773535 chr8:62519877-62519878(-) m6A CDS//intron       24981863//27773535 chr8:62530104-62530105(-) Tm intron       - chr8:62531549-62531550(-) m6A CDS//exon//intron       24981863//27773535 chr8:62531563-62531564(-) m6A CDS//exon//intron       24981863//27773535 chr8:62531575-62531576(-) m6A CDS//exon//intron       24981863//27773535 chr8:62537278-62537279(-) m6A 3'UTR//intron       26404942 chr8:62537321-62537322(-) m6A 3'UTR//intron       26404942 chr8:62537339-62537340(-) m6A 3'UTR//intron       26404942 chr8:62537398-62537399(-) m6A 3'UTR//intron       26404942 chr8:62537486-62537487(-) m6A 3'UTR//intron       26404942 chr8:62537693-62537694(-) m6A 3'UTR//intron       26404942 chr8:62537907-62537908(-) m6A 3'UTR//intron       26404942 chr8:62537932-62537933(-) m6A 3'UTR//intron       26404942 chr8:62538011-62538012(-) m6A 3'UTR//intron       26404942 chr8:62538123-62538124(-) m6A 3'UTR//intron       26404942 chr8:62538399-62538400(-) m6A 3'UTR//exon//intron       26404942 chr8:62538423-62538424(-) m6A 3'UTR//exon//intron       26404942 chr8:62538711-62538712(-) m6A 3'UTR//exon//intron       26404942 chr8:62538795-62538796(-) m6A 3'UTR//exon//intron       26404942//27773535 chr8:62538818-62538819(-) m6A 3'UTR//exon//intron       26404942//27773535 chr8:62546260-62546261(-) m6A CDS//exon//intron       24981863//27773535 chr8:62550911-62550912(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62555450-62555451(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62555981-62555982(-) m6A CDS//intron       24981863//26404942//27773535//22575960 chr8:62556550-62556551(-) m6A CDS//intron       24981863//26404942//27773535//22575960 chr8:62557161-62557162(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62557188-62557189(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62559327-62559328(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62559335-62559336(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62559393-62559394(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62559405-62559406(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62559424-62559425(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62563612-62563613(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62563651-62563652(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62563681-62563682(-) m6A CDS//exon//intron       24981863//26404942//27773535//22575960 chr8:62563985-62563986(-) m6A exon//intron       24981863//26404942//27773535//22575960 chr8:62569045-62569046(-) m6A 3'UTR//intron       - chr8:62569117-62569118(-) m6A 3'UTR//intron       - chr8:62569165-62569166(-) m6A 3'UTR//intron       - chr8:62569227-62569228(-) m6A 3'UTR//intron       - chr8:62569233-62569234(-) m6A 3'UTR//intron       - chr8:62574252-62574253(-) m6A 3'UTR//intron       24981863//27773535//22575960 chr8:62574381-62574382(-) m6A 3'UTR//exon//intron       24981863//26404942//27773535//22608085 chr8:62574402-62574403(-) m6A 3'UTR//exon//intron       24981863//26404942//27773535//22608085 chr8:62574435-62574436(-) m6A 3'UTR//exon//intron       24981863//26404942//27773535 chr8:62577785-62577786(-) m6A 3'UTR//intron       27773535 chr8:62577891-62577892(-) m6A CDS//intron       24981863//27773535//22608085 chr8:62577955-62577956(-) m6A CDS//intron       25456834//24981863//27773535//22608085 chr8:62577975-62577976(-) m6A CDS//intron       25456834//24981863//27773535//22608085 chr8:62577996-62577997(-) m6A CDS//intron       25456834//24981863//27773535//22608085 chr8:62578032-62578033(-) m6A CDS//intron       25456834//24981863//27773535//22608085 chr8:62578121-62578122(-) m6A CDS//intron       24981863//27773535//22608085 chr8:62578157-62578158(-) m6A CDS//intron       24981863//27773535//22608085 chr8:62580804-62580805(-) m6A CDS//intron       27773535 chr8:62580829-62580830(-) m6A CDS//intron       27773535 chr8:62593590-62593591(-) m6A CDS//exon       26404942 chr8:62595029-62595030(-) m6A CDS//intron       26404942 chr8:62596648-62596649(-) m6A CDS//exon       24209618//26404942//22575960 chr8:62596696-62596697(-) m6A CDS//exon       24284625//24209618//26404942//22575960 chr8:62596706-62596707(-) m6A CDS//exon       24284625//24209618//26404942//22575960 chr8:62596730-62596731(-) m6A CDS//exon       24284625//24209618//26404942//22575960 chr8:62596744-62596745(-) m6A CDS//exon       24284625//24209618//26404942//22575960 chr8:62602327-62602328(-) m6A 5'UTR//intron       24981863 chr8:62626937-62626938(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27371828//27773536//22575960 chr8:62627034-62627035(-) m6A 5'UTR       24284625//24209618//24981863//26404942//27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ASPH	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART15
Interactor2: ASPH

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg