Detail Information

Basic Information:


  VIRBase ID:  

VHID00354749

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-3p:           RAB5IF:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART14-3p RAB5IF
miRBase
Accession/Entrez ID
MIMAT0003426 55969
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - C20orf24//PNAS-11//RCAF1//RIP5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RAB5IF
chr20:35239593(+) A-I      intronic
chr20:35237084(+) A-I      intronic
chr20:35239448(+) A-I      intronic
chr20:35236717(+) A-I      intronic
chr20:35239602(+) A-I      intronic
chr20:35239623(+) A-I      intronic
chr20:35238509(+) A-I      intronic
chr20:35238550(+) A-I      intronic
chr20:35238880(+) A-I      intronic
chr20:35239654(+) A-I      intronic
chr20:35239580(+) A-I      intronic
chr20:35239567(+) A-I      intronic
chr20:35239492(+) A-I      intronic
chr20:35239085(+) A-I      intronic
chr20:35238983(+) A-I      intronic
chr20:35236838(+) A-I      intronic
chr20:35239522(+) A-I      intronic
chr20:35237746(+) A-I      intronic
chr20:35239039(+) A-I      intronic
chr20:35238977(+) A-I      intronic
chr20:35238572(+) A-I      intronic
chr20:35239510(+) A-I      intronic
chr20:35239659(+) A-I      intronic
chr20:35238850(+) A-I      intronic
chr20:35239576(+) A-I      intronic
chr20:35239775(+) A-I      intronic
chr20:35238987(+) A-I      intronic
chr20:35238608(+) A-I      intronic
chr20:35237053(+) A-I      intronic
chr20:35237808(+) A-I      intronic
chr20:35239532(+) A-I      intronic
chr20:35239573(+) A-I      intronic
chr20:35238567(+) A-I      intronic
chr20:35236789(+) A-I      intronic
chr20:35239744(+) A-I      intronic
chr20:35239656(+) A-I      intronic
chr20:35238566(+) A-I      intronic
chr20:35238471(+) A-I      intronic
chr20:35239745(+) A-I      intronic
chr20:35239493(+) A-I      intronic
chr20:35239628(+) A-I      intronic
chr20:35239851(+) A-I      intronic
chr20:35239534(+) A-I      intronic
chr20:35238431(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BART14-3p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
RAB5IF
Exosome Blood     -
Nucleolus K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART14-3p
Interactor2: RAB5IF

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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