Detail Information

Basic Information:


  VIRBase ID:  

VHID00354264

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-3p:           UBQLN1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART14-3p UBQLN1
miRBase
Accession/Entrez ID		 MIMAT0003426 29979
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - DA41//DSK2//PLIC-1//UBQN//XDRP1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UBQLN1
chr9:86293101(-) A-I      intronic
chr9:86312779(-) A-I      intronic
chr9:86312678(-) A-I      intronic
chr9:86299139(-) A-I      intronic
chr9:86298771(-) A-I      intronic
chr9:86298745(-) A-I      intronic
chr9:86293225(-) A-I      intronic
chr9:86299238(-) A-I      intronic
chr9:86293075(-) A-I      intronic
chr9:86293069(-) A-I      intronic
chr9:86292394(-) A-I      intronic
chr9:86312461(-) A-I      intronic
chr9:86288892(-) A-I      intronic
chr9:86299186(-) A-I      intronic
chr9:86311471(-) A-I      intronic
chr9:86299383(-) A-I      intronic
chr9:86299391(-) A-I      intronic
chr9:86299482(-) A-I      intronic
chr9:86288747(-) A-I      intronic
chr9:86299484(-) A-I      intronic
chr9:86299563(-) A-I      intronic
chr9:86299498(-) A-I      intronic
chr9:86299501(-) A-I      intronic
chr9:86299510(-) A-I      intronic
chr9:86299673(-) A-I      intronic
chr9:86288884(-) A-I      intronic
chr9:86310284(-) A-I      intronic
chr9:86310314(-) A-I      intronic
chr9:86288978(-) A-I      intronic
chr9:86319679(-) A-I      intronic
chr9:86313719(-) A-I      intronic
chr9:86311442(-) A-I      intronic
chr9:86288887(-) A-I      intronic
chr9:86313716(-) A-I      intronic
chr9:86320437(-) A-I      intronic
chr9:86319678(-) A-I      intronic
chr9:86313815(-) A-I      intronic
chr9:86313785(-) A-I      intronic
chr9:86313783(-) A-I      intronic
chr9:86313782(-) A-I      intronic
chr9:86313746(-) A-I      intronic
chr9:86319647(-) A-I      intronic
chr9:86313673(-) A-I      intronic
chr9:86299172(-) A-I      intronic
chr9:86312883(-) A-I      intronic
chr9:86313657(-) A-I      intronic
chr9:86313617(-) A-I      intronic
chr9:86310216(-) A-I      intronic
chr9:86312367(-) A-I      intronic
chr9:86320338(-) A-I      intronic
chr9:86312821(-) A-I      intronic
chr9:86310273(-) A-I      intronic
chr9:86319618(-) A-I      intronic
chr9:86299303(-) A-I      intronic
chr9:86288870(-) A-I      intronic
chr9:86312603(-) A-I      intronic
chr9:86320422(-) A-I      intronic
chr9:86312274(-) A-I      intronic
chr9:86319600(-) A-I      intronic
chr9:86298138(-) A-I      intronic
chr9:86298779(-) A-I      intronic
chr9:86311986(-) A-I      intronic
chr9:86313571(-) A-I      intronic
chr9:86319591(-) A-I      intronic
chr9:86313579(-) A-I      intronic
chr9:86279642(-) A-I      intronic
chr9:86288922(-) A-I      intronic
chr9:86288801(-) A-I      intronic
chr9:86320253(-) A-I      intronic
chr9:86288941(-) A-I      intronic
chr9:86288965(-) A-I      intronic
chr9:86299618(-) A-I      intronic
chr9:86288033(-) A-I      intronic
chr9:86312300(-) A-I      intronic
chr9:86299717(-) A-I      intronic
chr9:86285957(-) A-I      intronic
chr9:86319560(-) A-I      intronic
chr9:86313745(-) A-I      intronic
chr9:86288082(-) A-I      intronic
chr9:86277763(-) A-I      intronic
chr9:86311954(-) A-I      intronic
chr9:86319592(-) A-I      intronic
chr9:86310252(-) A-I      intronic
chr9:86312556(-) A-I      intronic
chr9:86314335(-) A-I      intronic
chr9:86298876(-) A-I      intronic
chr9:86299248(-) A-I      intronic
chr9:86319497(-) A-I      intronic
chr9:86303774(-) A-I      intronic
chr9:86320425(-) A-I      intronic
chr9:86299314(-) A-I      intronic
chr9:86319684(-) A-I      intronic
chr9:86320302(-) A-I      intronic
chr9:86320451(-) A-I      intronic
chr9:86320431(-) A-I      intronic
chr9:86288881(-) A-I      intronic
chr9:86288132(-) A-I      intronic
chr9:86320344(-) A-I      intronic
chr9:86312355(-) A-I      intronic
chr9:86299304(-) A-I      intronic
chr9:86297385(-) A-I      intronic
chr9:86288397(-) A-I      intronic
chr9:86288852(-) A-I      intronic
chr9:86319630(-) A-I      intronic
chr9:86319697(-) A-I      intronic
chr9:86313703(-) A-I      intronic
chr9:86312923(-) A-I      intronic
chr9:86312283(-) A-I      intronic
chr9:86310297(-) A-I      intronic
chr9:86287962(-) A-I      intronic
chr9:86288061(-) A-I      intronic
chr9:86299389(-) A-I      intronic
chr9:86312819(-) A-I      intronic
chr9:86288820(-) A-I      intronic
chr9:86319620(-) A-I      intronic
chr9:86312824(-) A-I      intronic
chr9:86319568(-) A-I      intronic
chr9:86312319(-) A-I      intronic
chr9:86299188(-) A-I      intronic
chr9:86299470(-) A-I      intronic
chr9:86312772(-) A-I      intronic
chr9:86288203(-) A-I      intronic
chr9:86288877(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED UBQLN1
chr9:86288855(-) A-G intron -    22484847
chr9:86288922(-) A-G intron -    22484847
chr9:86319491(-) A-G intron -    22484847
chr9:86319497(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBQLN1
chr9:86276068-86276069(-) m6A 3'UTR//exon       26404942
chr9:86276157-86276158(-) m6A 3'UTR//exon       26404942
chr9:86276647-86276648(-) m6A 3'UTR//exon       26404942//22575960
chr9:86276777-86276778(-) m6A CDS//exon       26404942
chr9:86276789-86276790(-) m6A CDS//exon       26404942
chr9:86276815-86276816(-) m6A CDS//exon       26404942
chr9:86278908-86278909(-) m6A CDS//exon       26404942
chr9:86279978-86279979(-) m6A CDS//exon       26404942
chr9:86280025-86280026(-) m6A CDS//exon       26404942
chr9:86280269-86280270(-) m6A exon//intron       24981863
chr9:86281291-86281292(-) m6A CDS//exon//intron       24981863
chr9:86281300-86281301(-) m6A CDS//exon//intron       24981863
chr9:86292764-86292765(-) m6A CDS//exon       26404942
chr9:86293382-86293383(-) m6A CDS//exon       26404942
chr9:86293458-86293459(-) m6A CDS//exon       26404942
chr9:86293464-86293465(-) m6A CDS//exon       26404942
chr9:86293505-86293506(-) m6A CDS//exon       26404942
chr9:86294692-86294693(-) m6A CDS//exon//intron       26404942
chr9:86294782-86294783(-) m6A CDS//exon//intron       26404942
chr9:86322467-86322468(-) m6A CDS       22575960
chr9:86322817-86322818(-) m6A 5'UTR       24209618//25456834//24981863//27371828//22575960//22608085
chr9:86323069-86323070(-) m6A 5'UTR       22608085
chr9:86323076-86323077(-) m6A 5'UTR       22608085
chr9:86323113-86323114(-) m6A 5'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BART14-3p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
UBQLN1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART14-3p
Interactor2: UBQLN1

Evidence Support:


Prediction-Evidence miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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