Basic Information:

  VIRBase ID:  

VHID00353604

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-3p:  MIMAT0003426          TUBB4B:  NM_006088     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART14-3p	TUBB4B
miRBase Accession/Entrez ID	MIMAT0003426	10383
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Beta2//LCAEOD//TUBB2//TUBB2C

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TUBB4B	chr9:140135685-140135686(+) m6A 5'UTR       24209618//25456834//24981863 chr9:140136230-140136231(+) m6A CDS//exon       24284625//24209618//24981863//22575960 chr9:140136416-140136417(+) m6A CDS//exon       24284625//24209618//22575960//22608085 chr9:140136458-140136459(+) m6A CDS//exon       24284625//24209618//22575960//22608085 chr9:140136490-140136491(+) m6A exon//intron       24284625//24209618//22575960//22608085 chr9:140136543-140136544(+) m6A exon//intron       24284625//24209618//24981863//22575960//22608085 chr9:140136965-140136966(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:140137010-140137011(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:140137029-140137030(+) Gm CDS//exon       - chr9:140137096-140137097(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:140137151-140137152(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:140137163-140137164(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:140137199-140137200(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:140137253-140137254(+) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr9:140137264-140137265(+) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr9:140137309-140137310(+) m6A CDS//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr9:140137346-140137347(+) m6A CDS//exon       24284625//24981863//26404942//27773535//22575960//22608085 chr9:140137362-140137363(+) Y CDS//exon       26075521 chr9:140137436-140137437(+) m6A CDS//exon       24284625//24981863//22575960//22608085 chr9:140137562-140137563(+) m6A CDS//exon       24284625//24981863//22575960 chr9:140137673-140137674(+) m6A CDS//exon       24981863//26404942//22575960 chr9:140137679-140137680(+) m6A CDS//exon       24981863//26404942//22575960 chr9:140137801-140137802(+) Y CDS//exon       26075521 chr9:140138046-140138047(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22575960 chr9:140138131-140138132(+) m6A 3'UTR//exon       24284625//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART14-3p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TUBB4B	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART14-3p
Interactor2: TUBB4B

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg