Detail Information

Basic Information:


  VIRBase ID:  

VHID00351630

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-5p:           ZNF677:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART14-5p ZNF677
miRBase
Accession/Entrez ID		 MIMAT0003425 342926
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF677
chr19:53729962(-) A-I      intronic
chr19:53729924(-) A-I      intronic
chr19:53732390(-) A-I      intronic
chr19:53729974(-) A-I      intronic
chr19:53729961(-) A-I      intronic
chr19:53732375(-) A-I      intronic
chr19:53729968(-) A-I      intronic
chr19:53732408(-) A-I      intronic
chr19:53737606(-) A-I      intronic
chr19:53737627(-) A-I      intronic
chr19:53729963(-) A-I      intronic
chr19:53732217(-) A-I      intronic
chr19:53732209(-) A-I      intronic
chr19:53736806(-) A-I      3'UTR
chr19:53729953(-) A-I      intronic
chr19:53732389(-) A-I      intronic
chr19:53732222(-) A-I      intronic
chr19:53729956(-) A-I      intronic
chr19:53732310(-) A-I      intronic
chr19:53729923(-) A-I      intronic
chr19:53729901(-) A-I      intronic
chr19:53736807(-) A-I      3'UTR
chr19:53737609(-) A-I      intronic
chr19:53737623(-) A-I      intronic
chr19:53743628(-) A-I      intronic
chr19:53743638(-) A-I      intronic
chr19:53733591(-) A-I      intronic
chr19:53743771(-) A-I      intronic
chr19:53737587(-) A-I      intronic
chr19:53732278(-) A-I      intronic
chr19:53733434(-) A-I      intronic
chr19:53737592(-) A-I      intronic
chr19:53737619(-) A-I      intronic
chr19:53736031(-) A-I      3'UTR
chr19:53736924(-) A-I      3'UTR
chr19:53737643(-) A-I      3'UTR
chr19:53734986(-) A-I      3'UTR
chr19:53739185(-) A-I      3'UTR
chr19:53736801(-) A-I      3'UTR
chr19:53732336(-) A-I      intronic
chr19:53729950(-) A-I      intronic
chr19:53737524(-) A-I      intronic
chr19:53733596(-) A-I      intronic
chr19:53743505(-) A-I      intronic
chr19:53733461(-) A-I      intronic
chr19:53732292(-) A-I      intronic
chr19:53737563(-) A-I      intronic
chr19:53732207(-) A-I      intronic
chr19:53732363(-) A-I      intronic
chr19:53737483(-) A-I      intronic
chr19:53735621(-) A-I      3'UTR
chr19:53735912(-) A-I      3'UTR
chr19:53732285(-) A-I      intronic
chr19:53736029(-) A-I      3'UTR
chr19:53739250(-) A-I      3'UTR
chr19:53734952(-) A-I      3'UTR
chr19:53737063(-) A-I      3'UTR
chr19:53732406(-) A-I      intronic
chr19:53737148(-) A-I      3'UTR
chr19:53736850(-) A-I      3'UTR
chr19:53736825(-) A-I      3'UTR
chr19:53735997(-) A-I      3'UTR
chr19:53735922(-) A-I      3'UTR
chr19:53736052(-) A-I      3'UTR
chr19:53737115(-) A-I      3'UTR
chr19:53737445(-) A-I      intronic
chr19:53733460(-) A-I      intronic
chr19:53736824(-) A-I      3'UTR
chr19:53733391(-) A-I      intronic
chr19:53737172(-) A-I      3'UTR
chr19:53737102(-) A-I      3'UTR
chr19:53737573(-) A-I      intronic
chr19:53736809(-) A-I      3'UTR
chr19:53737732(-) A-I      3'UTR
chr19:53739451(-) A-I      3'UTR
chr19:53737176(-) A-I      3'UTR
chr19:53732288(-) A-I      intronic
chr19:53739345(-) A-I      3'UTR
chr19:53739357(-) A-I      3'UTR
chr19:53736826(-) A-I      3'UTR
chr19:53735942(-) A-I      3'UTR
chr19:53735012(-) A-I      3'UTR
chr19:53736759(-) A-I      3'UTR
chr19:53737075(-) A-I      3'UTR
chr19:53736794(-) A-I      3'UTR
chr19:53739333(-) A-I      3'UTR
chr19:53736000(-) A-I      3'UTR
chr19:53735449(-) A-I      3'UTR
chr19:53739400(-) A-I      3'UTR
chr19:53734966(-) A-I      3'UTR
chr19:53736902(-) A-I      3'UTR
chr19:53733597(-) A-I      intronic
chr19:53737460(-) A-I      intronic
chr19:53732417(-) A-I      intronic
chr19:53735630(-) A-I      3'UTR
chr19:53736693(-) A-I      3'UTR
chr19:53736660(-) A-I      3'UTR
chr19:53737135(-) A-I      3'UTR
chr19:53737659(-) A-I      3'UTR
chr19:53735495(-) A-I      3'UTR
chr19:53732195(-) A-I      3'UTR
chr19:53736827(-) A-I      3'UTR
chr19:53735006(-) A-I      3'UTR
chr19:53736678(-) A-I      3'UTR
chr19:53736808(-) A-I      3'UTR
chr19:53737140(-) A-I      3'UTR
chr19:53737635(-) A-I      3'UTR
chr19:53736863(-) A-I      3'UTR
chr19:53735972(-) A-I      3'UTR
chr19:53737427(-) A-I      intronic
chr19:53732358(-) A-I      intronic
chr19:53747547(-) A-I      intronic
chr19:53737306(-) A-I      intronic
chr19:53733330(-) A-I      NonSyn:Lys->Glu
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF677
chr19:53738985(-) A-I exon 3'UTR    15342557
chr19:53739250(-) A-I exon 3'UTR    15342557
chr19:53739333(-) A-I exon 3'UTR    15342557
chr19:53739345(-) A-I exon 3'UTR    15342557
chr19:53739357(-) A-I exon 3'UTR    15342557
chr19:53739374(-) A-I exon 3'UTR    15342557
chr19:53739375(-) A-I exon 3'UTR    15342557
chr19:53739394(-) A-I exon 3'UTR    15342557
chr19:53739395(-) A-I exon 3'UTR    15342557
chr19:53739400(-) A-I exon 3'UTR    15342557
chr19:53739451(-) A-I exon 3'UTR    15342557
chr19:53740867(-) A-I exon CDS    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF677
chr19:53740440-53740441(-) m6A CDS       24981863
chr19:53740524-53740525(-) m6A CDS       24981863
chr19:53740541-53740542(-) m6A CDS       24981863
chr19:53741065-53741066(-) m6A CDS       24981863
chr19:53741112-53741113(-) m6A CDS       24981863
chr19:53741118-53741119(-) m6A CDS       24981863
chr19:53741149-53741150(-) m6A CDS       24981863
chr19:53741647-53741648(-) m6A CDS       24981863
chr19:53744942-53744943(-) m6A 3'UTR//exon//intron       25456834//24981863
chr19:53745046-53745047(-) m6A 3'UTR//exon//intron       25456834//24981863
chr19:53745062-53745063(-) m6A CDS//intron       25456834//24981863
chr19:53745096-53745097(-) m6A CDS//intron       25456834//24981863
chr19:53745110-53745111(-) m6A CDS//intron       25456834//24981863
chr19:53745210-53745211(-) m6A 3'UTR//intron       25456834//24981863
chr19:53745377-53745378(-) m6A 3'UTR//intron       24981863
chr19:53745400-53745401(-) m6A 3'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF677
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART14-5p
Interactor2: ZNF677

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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