Detail Information

Basic Information:


  VIRBase ID:  

VHID00351576

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-5p:           SLC25A30:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART14-5p SLC25A30
miRBase
Accession/Entrez ID		 MIMAT0003425 253512
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - KMCP1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SLC25A30
chr13:45974796(-) A-I      intronic
chr13:45988669(-) A-I      intronic
chr13:45974800(-) A-I      intronic
chr13:45985213(-) A-I      intronic
chr13:45973351(-) A-I      intronic
chr13:45990072(-) A-I      intronic
chr13:45990684(-) A-I      intronic
chr13:45973492(-) A-I      intronic
chr13:45989660(-) A-I      intronic
chr13:45984591(-) A-I      intronic
chr13:45978845(-) A-I      intronic
chr13:45981633(-) A-I      intronic
chr13:45978749(-) A-I      intronic
chr13:45990007(-) A-I      intronic
chr13:45990020(-) A-I      intronic
chr13:45987862(-) A-I      intronic
chr13:45974365(-) A-I      intronic
chr13:45974875(-) A-I      intronic
chr13:45990461(-) A-I      intronic
chr13:45984839(-) A-I      intronic
chr13:45984646(-) A-I      intronic
chr13:45979241(-) A-I      intronic
chr13:45987870(-) A-I      intronic
chr13:45974807(-) A-I      intronic
chr13:45989668(-) A-I      intronic
chr13:45990200(-) A-I      intronic
chr13:45985235(-) A-I      intronic
chr13:45978724(-) A-I      intronic
chr13:45989737(-) A-I      intronic
chr13:45987792(-) A-I      intronic
chr13:45987724(-) A-I      intronic
chr13:45990011(-) A-I      intronic
chr13:45990806(-) A-I      intronic
chr13:45990740(-) A-I      intronic
chr13:45988745(-) A-I      intronic
chr13:45989799(-) A-I      intronic
chr13:45990371(-) A-I      intronic
chr13:45989840(-) A-I      intronic
chr13:45978917(-) A-I      intronic
chr13:45989856(-) A-I      intronic
chr13:45990338(-) A-I      intronic
chr13:45987786(-) A-I      intronic
chr13:45974761(-) A-I      intronic
chr13:45990179(-) A-I      intronic
chr13:45978788(-) A-I      intronic
chr13:45989729(-) A-I      intronic
chr13:45986518(-) A-I      intronic
chr13:45974322(-) A-I      intronic
chr13:45974764(-) A-I      intronic
chr13:45980479(-) A-I      intronic
chr13:45990059(-) A-I      intronic
chr13:45974689(-) A-I      intronic
chr13:45990467(-) A-I      intronic
chr13:45985321(-) A-I      intronic
chr13:45989738(-) A-I      intronic
chr13:45979198(-) A-I      intronic
chr13:45989849(-) A-I      intronic
chr13:45990505(-) A-I      intronic
chr13:45978870(-) A-I      intronic
chr13:45990491(-) A-I      intronic
chr13:45974729(-) A-I      intronic
chr13:45979309(-) A-I      intronic
chr13:45985334(-) A-I      intronic
chr13:45989764(-) A-I      intronic
chr13:45989774(-) A-I      intronic
chr13:45974417(-) A-I      intronic
chr13:45978832(-) A-I      intronic
chr13:45988589(-) A-I      intronic
chr13:45989641(-) A-I      intronic
chr13:45990433(-) A-I      intronic
chr13:45974720(-) A-I      intronic
chr13:45981626(-) A-I      intronic
chr13:45974878(-) A-I      intronic
chr13:45981688(-) A-I      intronic
chr13:45988718(-) A-I      intronic
chr13:45988747(-) A-I      intronic
chr13:45991325(-) A-I      intronic
chr13:45991241(-) A-I      intronic
chr13:45985339(-) A-I      intronic
chr13:45985268(-) A-I      intronic
chr13:45974535(-) A-I      intronic
chr13:45974808(-) A-I      intronic
chr13:45981507(-) A-I      intronic
chr13:45984864(-) A-I      intronic
chr13:45974888(-) A-I      intronic
chr13:45981448(-) A-I      intronic
chr13:45978750(-) A-I      intronic
chr13:45979222(-) A-I      intronic
chr13:45979155(-) A-I      intronic
chr13:45984653(-) A-I      intronic
chr13:45981548(-) A-I      intronic
chr13:45991324(-) A-I      intronic
chr13:45973505(-) A-I      intronic
chr13:45974809(-) A-I      intronic
chr13:45988640(-) A-I      intronic
chr13:45987646(-) A-I      intronic
chr13:45988746(-) A-I      intronic
chr13:45987858(-) A-I      intronic
chr13:45978890(-) A-I      intronic
chr13:45991287(-) A-I      intronic
chr13:45989723(-) A-I      intronic
chr13:45984825(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SLC25A30
chr13:45968292-45968293(-) m6A 3'UTR//exon       24981863
chr13:45969501-45969502(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085
chr13:45969620-45969621(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr13:45969626-45969627(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr13:45969718-45969719(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:45969742-45969743(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:45969826-45969827(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:45969901-45969902(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr13:45969913-45969914(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:45969979-45969980(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr13:45970059-45970060(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr13:45970088-45970089(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr13:45970289-45970290(-) m6A exon//intron       -
chr13:45978541-45978542(-) m6A 3'UTR//CDS       27773535
chr13:45986027-45986028(-) m6A 5'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SLC25A30
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART14-5p
Interactor2: SLC25A30

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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