Detail Information

Basic Information:


  VIRBase ID:  

VHID00351054

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-5p:           DDN:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART14-5p DDN
miRBase
Accession/Entrez ID
MIMAT0003425 23109
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DDN
chr12:49389040-49389041(-) m6A 3'UTR       -
chr12:49389105-49389106(-) m6A 3'UTR       27773535
chr12:49389140-49389141(-) m6A 3'UTR       24981863
chr12:49389177-49389178(-) m6A 3'UTR       24981863
chr12:49389183-49389184(-) m6A 3'UTR       24981863
chr12:49389238-49389239(-) m6A 3'UTR       -
chr12:49390551-49390552(-) m6A CDS       24981863
chr12:49390562-49390563(-) m6A CDS       24981863
chr12:49390590-49390591(-) m6A CDS       25456834//24981863
chr12:49390633-49390634(-) m6A CDS       25456834//24981863//27371828
chr12:49390641-49390642(-) m6A CDS       25456834//24981863//27371828
chr12:49390667-49390668(-) m6A CDS       25456834//24981863//27371828//22608085
chr12:49390686-49390687(-) m6A CDS       25456834//24981863//27371828//22608085
chr12:49390778-49390779(-) m6A CDS       24981863//22575960//22608085
chr12:49390851-49390852(-) m6A CDS       22575960
chr12:49390988-49390989(-) m6A CDS       22575960
chr12:49391045-49391046(-) m6A CDS       22575960
chr12:49391382-49391383(-) m6A CDS       25456834//22608085
chr12:49391389-49391390(-) m6A CDS       25456834//22608085
chr12:49391449-49391450(-) m6A CDS       25456834//24981863//22608085
chr12:49391460-49391461(-) m6A CDS       25456834//24981863//22608085
chr12:49391524-49391525(-) m6A CDS       22608085
chr12:49391681-49391682(-) m6A CDS       27773536//22608085
chr12:49391868-49391869(-) m6A CDS       25456834//24981863//27371828//27773536//22575960//22608085
chr12:49391915-49391916(-) m6A CDS       25456834//24981863//22575960//22608085
chr12:49391934-49391935(-) m6A CDS       25456834//24981863//22575960//22608085
chr12:49391943-49391944(-) m6A CDS       25456834//24981863//22575960//22608085
chr12:49391993-49391994(-) m6A CDS       24981863//22575960//22608085
chr12:49392015-49392016(-) m6A CDS       24981863//22575960//22608085
chr12:49392285-49392286(-) m6A CDS       27773536
chr12:49392867-49392868(-) m6A CDS       -
chr12:49392903-49392904(-) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DDN
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART14-5p
Interactor2: DDN

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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