Basic Information:

  VIRBase ID:  

VHID00350621

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-5p:  MIMAT0003425          CLIC2:  NM_001289     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART14-5p	CLIC2
miRBase Accession/Entrez ID	MIMAT0003425	1193
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CLCNL2//CLIC2b//MRXS32//XAP121

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CLIC2	chrX:154535774(-) A-I      intronic chrX:154535814(-) A-I      intronic chrX:154535812(-) A-I      intronic chrX:154535809(-) A-I      intronic chrX:154535781(-) A-I      intronic chrX:154535779(-) A-I      intronic chrX:154535778(-) A-I      intronic chrX:154535777(-) A-I      intronic chrX:154542405(-) A-I      intronic chrX:154513679(-) A-I      intronic chrX:154516871(-) A-I      intronic chrX:154513715(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CLIC2	chrX:154535769(-) A-G intron -    22484847 chrX:154535771(-) A-G intron -    22484847 chrX:154536241(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CLIC2	chrX:154505506-154505507(-) m6A 3'UTR       27773535 chrX:154505576-154505577(-) m6A 3'UTR       27773535 chrX:154505943-154505944(-) m6A 3'UTR       27773535 chrX:154506528-154506529(-) m6A 3'UTR       27773535 chrX:154506543-154506544(-) m6A 3'UTR       27773535 chrX:154506632-154506633(-) m6A 3'UTR       27773535 chrX:154506651-154506652(-) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CLIC2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART14-5p
Interactor2: CLIC2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg