Detail Information

Basic Information:


  VIRBase ID:  

VHID00350584

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART14-5p:           AQP3:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART14-5p AQP3
miRBase
Accession/Entrez ID
MIMAT0003425 360
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - AQP-3//GIL

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AQP3
chr9:33441157-33441158(-) m6A 3'UTR//exon       27773535
chr9:33441638-33441639(-) m6A 3'UTR//exon       24284625//22575960
chr9:33441678-33441679(-) m6A 3'UTR//exon       24284625//22575960
chr9:33441828-33441829(-) m6A 3'UTR//exon       24284625//22575960
chr9:33441876-33441877(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22575960
chr9:33441901-33441902(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22575960
chr9:33442207-33442208(-) m6A CDS//exon       24284625
chr9:33442352-33442353(-) m6A CDS//exon       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate AQP3
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART14-5p
Interactor2: AQP3

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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