Basic Information:

  VIRBase ID:  

VHID00350280

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          BOD1L1:  NM_148894     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	BOD1L1
miRBase Accession/Entrez ID	MIMAT0003424	259282
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BOD1L//FAM44A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BOD1L1	chr4:13575564(-) A-I      intronic chr4:13575560(-) A-I      intronic chr4:13575519(-) A-I      intronic chr4:13575568(-) A-I      intronic chr4:13575573(-) A-I      intronic chr4:13575543(-) A-I      intronic chr4:13575582(-) A-I      intronic chr4:13575574(-) A-I      intronic chr4:13579569(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BOD1L1	chr4:13580220(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BOD1L1	chr4:13571271-13571272(-) m6A 3'UTR       27773535 chr4:13571329-13571330(-) m6A 3'UTR       27773535 chr4:13571395-13571396(-) m6A 3'UTR       27773535 chr4:13571402-13571403(-) m6A 3'UTR       27773535 chr4:13571426-13571427(-) m6A 3'UTR//exon       27773535 chr4:13571472-13571473(-) m6A 3'UTR//exon       27773535 chr4:13571484-13571485(-) m6A 3'UTR//exon       27773535 chr4:13571580-13571581(-) m6A 3'UTR//exon       24284625//28052920//27773535//27371828 chr4:13571600-13571601(-) m6A 3'UTR//exon       24284625//28052920//27773535//27371828 chr4:13571687-13571688(-) m6A CDS//exon       24284625//24981863//28052920//27773535//27371828//27773536 chr4:13571744-13571745(-) m6A CDS//exon       24284625//24981863//27773535//27371828//27773536 chr4:13574412-13574413(-) m6A CDS//intron       24284625//24981863//27773535//27371828//27773536 chr4:13574426-13574427(-) m6A CDS//intron       24284625//24981863//27773535//27371828//27773536 chr4:13578560-13578561(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536 chr4:13579060-13579061(-) m6A CDS//exon       24284625//25456834//24981863//27773535//27371828 chr4:13579237-13579238(-) m6A CDS//exon       24981863//27773535 chr4:13579329-13579330(-) m6A exon//intron       24981863//27773535 chr4:13581554-13581555(-) m6A CDS//exon       27773535 chr4:13581570-13581571(-) m6A CDS//exon       27773535 chr4:13581591-13581592(-) m6A CDS//exon       27773535 chr4:13581602-13581603(-) m6A exon//intron       27773535 chr4:13581640-13581641(-) m6A exon//intron       24981863//27773535 chr4:13582663-13582664(-) m6A CDS       24284625//24981863//27773535 chr4:13582770-13582771(-) m6A CDS       24284625//24981863//27773535 chr4:13582792-13582793(-) m6A CDS       24284625//24981863//27773535 chr4:13583913-13583914(-) m6A CDS//exon       24981863//28052920//27773535 chr4:13584311-13584312(-) m6A CDS//exon       24981863//27773535 chr4:13584323-13584324(-) m6A CDS//exon       24981863//27773535 chr4:13584352-13584353(-) m6A CDS//exon       24981863//27773535 chr4:13588063-13588064(-) m6A CDS//exon       24981863//27773535 chr4:13589326-13589327(-) m6A CDS//exon       24981863//27773535 chr4:13590394-13590395(-) m6A CDS//exon       24981863//27773535 chr4:13592048-13592049(-) m6A CDS//exon       27773535 chr4:13598751-13598752(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13600613-13600614(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr4:13600659-13600660(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr4:13600683-13600684(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr4:13600718-13600719(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr4:13600830-13600831(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr4:13600841-13600842(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr4:13600890-13600891(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr4:13600934-13600935(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13600996-13600997(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13601002-13601003(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13601085-13601086(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr4:13601091-13601092(-) m6A CDS       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr4:13601123-13601124(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr4:13601179-13601180(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr4:13601197-13601198(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr4:13601338-13601339(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13601459-13601460(-) m6A CDS       24284625//24981863//27773535//27371828//27773536//22608085 chr4:13601485-13601486(-) m6A CDS       24284625//24981863//27773535//27371828//27773536//22608085 chr4:13601555-13601556(-) m6A CDS       24284625//27773535//27371828//27773536 chr4:13601735-13601736(-) m6A CDS       27371828 chr4:13602222-13602223(-) m6A CDS       24981863//27773535 chr4:13602425-13602426(-) m6A CDS       24981863//27773535 chr4:13602695-13602696(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr4:13602809-13602810(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//27371828//22608085 chr4:13603031-13603032(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr4:13603212-13603213(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr4:13603356-13603357(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr4:13603440-13603441(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr4:13603494-13603495(-) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr4:13603514-13603515(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22608085 chr4:13603637-13603638(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13603649-13603650(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13603710-13603711(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13603824-13603825(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr4:13603885-13603886(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr4:13603890-13603891(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr4:13603949-13603950(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr4:13603980-13603981(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr4:13604023-13604024(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr4:13604075-13604076(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13604087-13604088(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13604120-13604121(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13604155-13604156(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr4:13604163-13604164(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr4:13604250-13604251(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr4:13604300-13604301(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr4:13604389-13604390(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13604431-13604432(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13604505-13604506(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13604601-13604602(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13604687-13604688(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr4:13604704-13604705(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13604734-13604735(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13604750-13604751(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13604814-13604815(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22575960//22608085 chr4:13604841-13604842(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13604857-13604858(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13604873-13604874(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13604964-13604965(-) m6A CDS       24284625//24981863//26404942//27773535//22575960//22608085 chr4:13605018-13605019(-) m6A CDS       24284625//24981863//26404942//27773535//22575960//22608085 chr4:13605051-13605052(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13605058-13605059(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13605080-13605081(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13605107-13605108(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13605114-13605115(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr4:13605175-13605176(-) m6A CDS       24284625//27773535//22608085 chr4:13605211-13605212(-) m6A CDS       24284625//27773535//22608085 chr4:13605248-13605249(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605431-13605432(-) m6A CDS       24981863//27773535//22608085 chr4:13605506-13605507(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605597-13605598(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605610-13605611(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605621-13605622(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605638-13605639(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605661-13605662(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605686-13605687(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605698-13605699(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605703-13605704(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605721-13605722(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605747-13605748(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605766-13605767(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605777-13605778(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13605802-13605803(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605825-13605826(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605859-13605860(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13605887-13605888(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606017-13606018(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606052-13606053(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13606077-13606078(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13606147-13606148(-) m6A CDS       24981863//27773535//22608085 chr4:13606164-13606165(-) m6A CDS       24981863//27773535//22608085 chr4:13606188-13606189(-) m6A CDS       24981863//27773535//22608085 chr4:13606254-13606255(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606266-13606267(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606297-13606298(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606313-13606314(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606326-13606327(-) m6A CDS       24284625//24981863//27773535//27371828//22608085 chr4:13606395-13606396(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13606447-13606448(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13606452-13606453(-) Cm CDS       - chr4:13606512-13606513(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13606551-13606552(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13606564-13606565(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13606592-13606593(-) m6A CDS       24284625//24981863//27773535//27371828//22575960//22608085 chr4:13606624-13606625(-) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr4:13606636-13606637(-) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr4:13606645-13606646(-) m6A CDS       24284625//24981863//27773535//22608085 chr4:13608748-13608749(-) m6A CDS       24981863//27773535//22608085 chr4:13608757-13608758(-) m6A CDS       24981863//27773535//22608085 chr4:13608785-13608786(-) m6A CDS       24981863//27773535//22608085 chr4:13608798-13608799(-) m6A CDS       24981863//27773535//22608085 chr4:13610245-13610246(-) m6A CDS       24981863//27773535//22608085 chr4:13610276-13610277(-) m6A CDS       24981863//27773535//22608085 chr4:13610930-13610931(-) m6A CDS       24981863//27773535//22608085 chr4:13610945-13610946(-) m6A CDS       24981863//27773535//22608085 chr4:13610961-13610962(-) m6A CDS       24981863//27773535//22608085 chr4:13610979-13610980(-) m6A CDS       24981863//27773535//22608085 chr4:13612575-13612576(-) m6A CDS       27773535 chr4:13612629-13612630(-) m6A CDS       27773535//22575960 chr4:13612661-13612662(-) m6A CDS       27773535//22575960 chr4:13612685-13612686(-) m6A CDS       24981863//27773535//22575960 chr4:13612691-13612692(-) m6A CDS       24981863//27773535//22575960 chr4:13612697-13612698(-) m6A CDS       24981863//27773535//22575960 chr4:13612711-13612712(-) m6A CDS       24981863//27773535//22575960//22608085 chr4:13615245-13615246(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr4:13615253-13615254(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr4:13615828-13615829(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr4:13615840-13615841(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr4:13615857-13615858(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr4:13615874-13615875(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr4:13615907-13615908(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr4:13615969-13615970(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr4:13616013-13616014(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr4:13616034-13616035(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//22608085 chr4:13616176-13616177(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr4:13616183-13616184(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr4:13616229-13616230(-) m6A 3'UTR//CDS       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:13616239-13616240(-) m6A 3'UTR//CDS       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:13616285-13616286(-) m6A 3'UTR//CDS       24284625//25456834//24981863//26404942//27773535//27371828//22608085 chr4:13616308-13616309(-) m6A 3'UTR//CDS       24284625//24981863//26404942//27773535//22608085 chr4:13616323-13616324(-) m6A 3'UTR//CDS       24284625//24981863//26404942//27773535//22608085 chr4:13616374-13616375(-) m6A 3'UTR//CDS       24284625//27773535//22608085 chr4:13616955-13616956(-) m6A 3'UTR//CDS       27773535 chr4:13616960-13616961(-) m6A 3'UTR//CDS       27773535 chr4:13617050-13617051(-) m6A 3'UTR//CDS       27773535 chr4:13617075-13617076(-) m6A 3'UTR//CDS       27773535 chr4:13621580-13621581(-) m6A 3'UTR//CDS       27773535 chr4:13621590-13621591(-) m6A 3'UTR//CDS       27773535 chr4:13621602-13621603(-) m6A 3'UTR//CDS       27773535 chr4:13629280-13629281(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BOD1L1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: BOD1L1

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg