Basic Information:

  VIRBase ID:  

VHID00349606

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.6040

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          SGPP1:  NM_030791     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	SGPP1
miRBase Accession/Entrez ID	MIMAT0003424	81537
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SPP-1//SPPase1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SGPP1	chr14:64162485(-) A-I      intronic chr14:64178580(-) A-I      intronic chr14:64157573(-) A-I      intronic chr14:64162481(-) A-I      intronic chr14:64162480(-) A-I      intronic chr14:64162474(-) A-I      intronic chr14:64178593(-) A-I      intronic chr14:64186722(-) A-I      intronic chr14:64157561(-) A-I      intronic chr14:64154101(-) A-I      intronic chr14:64153996(-) A-I      intronic chr14:64153955(-) A-I      intronic chr14:64157534(-) A-I      intronic chr14:64178626(-) A-I      intronic chr14:64157526(-) A-I      intronic chr14:64156904(-) A-I      intronic chr14:64156879(-) A-I      intronic chr14:64156841(-) A-I      intronic chr14:64156427(-) A-I      intronic chr14:64156386(-) A-I      intronic chr14:64178599(-) A-I      intronic chr14:64191981(-) A-I      intronic chr14:64156463(-) A-I      intronic chr14:64184962(-) A-I      intronic chr14:64156890(-) A-I      intronic chr14:64175913(-) A-I      intronic chr14:64184866(-) A-I      intronic chr14:64184801(-) A-I      intronic chr14:64184269(-) A-I      intronic chr14:64184266(-) A-I      intronic chr14:64157040(-) A-I      intronic chr14:64184235(-) A-I      intronic chr14:64157603(-) A-I      intronic chr14:64157627(-) A-I      intronic chr14:64157660(-) A-I      intronic chr14:64184217(-) A-I      intronic chr14:64184204(-) A-I      intronic chr14:64184168(-) A-I      intronic chr14:64183692(-) A-I      intronic chr14:64183550(-) A-I      intronic chr14:64159750(-) A-I      intronic chr14:64162386(-) A-I      intronic chr14:64157724(-) A-I      intronic chr14:64183540(-) A-I      intronic chr14:64183504(-) A-I      intronic chr14:64183130(-) A-I      intronic chr14:64159269(-) A-I      intronic chr14:64183112(-) A-I      intronic chr14:64162504(-) A-I      intronic chr14:64183100(-) A-I      intronic chr14:64183049(-) A-I      intronic chr14:64183402(-) A-I      intronic chr14:64183046(-) A-I      intronic chr14:64159373(-) A-I      intronic chr14:64160507(-) A-I      intronic chr14:64183029(-) A-I      intronic chr14:64163604(-) A-I      intronic chr14:64160897(-) A-I      intronic chr14:64169345(-) A-I      intronic chr14:64181371(-) A-I      intronic chr14:64160986(-) A-I      intronic chr14:64183020(-) A-I      intronic chr14:64157597(-) A-I      intronic chr14:64181713(-) A-I      intronic chr14:64190337(-) A-I      intronic chr14:64161913(-) A-I      intronic chr14:64161935(-) A-I      intronic chr14:64153924(-) A-I      intronic chr14:64159863(-) A-I      intronic chr14:64187220(-) A-I      intronic chr14:64170308(-) A-I      intronic chr14:64186588(-) A-I      intronic chr14:64191993(-) A-I      intronic chr14:64162387(-) A-I      intronic chr14:64162450(-) A-I      intronic chr14:64162513(-) A-I      intronic chr14:64175047(-) A-I      intronic chr14:64181708(-) A-I      intronic chr14:64162546(-) A-I      intronic chr14:64181687(-) A-I      intronic chr14:64162607(-) A-I      intronic chr14:64181610(-) A-I      intronic chr14:64156872(-) A-I      intronic chr14:64181314(-) A-I      intronic chr14:64190797(-) A-I      intronic chr14:64157496(-) A-I      intronic chr14:64162623(-) A-I      intronic chr14:64159807(-) A-I      intronic chr14:64191946(-) A-I      intronic chr14:64181259(-) A-I      intronic chr14:64162749(-) A-I      intronic chr14:64179553(-) A-I      intronic chr14:64184245(-) A-I      intronic chr14:64177970(-) A-I      intronic chr14:64172380(-) A-I      intronic chr14:64160591(-) A-I      intronic chr14:64162776(-) A-I      intronic chr14:64179742(-) A-I      intronic chr14:64187314(-) A-I      intronic chr14:64156886(-) A-I      intronic chr14:64181562(-) A-I      intronic chr14:64162788(-) A-I      intronic chr14:64159845(-) A-I      intronic chr14:64177928(-) A-I      intronic chr14:64167934(-) A-I      intronic chr14:64163603(-) A-I      intronic chr14:64177909(-) A-I      intronic chr14:64170724(-) A-I      intronic chr14:64184312(-) A-I      intronic chr14:64175102(-) A-I      intronic chr14:64175992(-) A-I      intronic chr14:64162801(-) A-I      intronic chr14:64162836(-) A-I      intronic chr14:64162917(-) A-I      intronic chr14:64175178(-) A-I      intronic chr14:64187808(-) A-I      intronic chr14:64175106(-) A-I      intronic chr14:64162837(-) A-I      intronic chr14:64162860(-) A-I      intronic chr14:64160755(-) A-I      intronic chr14:64159306(-) A-I      intronic chr14:64192030(-) A-I      intronic chr14:64185892(-) A-I      intronic chr14:64179421(-) A-I      intronic chr14:64175082(-) A-I      intronic chr14:64173697(-) A-I      intronic chr14:64190271(-) A-I      intronic chr14:64160407(-) A-I      intronic chr14:64191984(-) A-I      intronic chr14:64160929(-) A-I      intronic chr14:64189127(-) A-I      intronic chr14:64187697(-) A-I      intronic chr14:64175079(-) A-I      intronic chr14:64174365(-) A-I      intronic chr14:64174321(-) A-I      intronic chr14:64191969(-) A-I      intronic chr14:64174284(-) A-I      intronic chr14:64191961(-) A-I      intronic chr14:64162894(-) A-I      intronic chr14:64174281(-) A-I      intronic chr14:64173721(-) A-I      intronic chr14:64190802(-) A-I      intronic chr14:64173715(-) A-I      intronic chr14:64190771(-) A-I      intronic chr14:64173707(-) A-I      intronic chr14:64190770(-) A-I      intronic chr14:64190763(-) A-I      intronic chr14:64173698(-) A-I      intronic chr14:64162941(-) A-I      intronic chr14:64162961(-) A-I      intronic chr14:64155507(-) A-I      intronic chr14:64183643(-) A-I      intronic chr14:64187356(-) A-I      intronic chr14:64173679(-) A-I      intronic chr14:64173598(-) A-I      intronic chr14:64166866(-) A-I      intronic chr14:64173595(-) A-I      intronic chr14:64173588(-) A-I      intronic chr14:64154119(-) A-I      intronic chr14:64167761(-) A-I      intronic chr14:64190742(-) A-I      intronic chr14:64162930(-) A-I      intronic chr14:64171843(-) A-I      intronic chr14:64190893(-) A-I      intronic chr14:64185939(-) A-I      intronic chr14:64190631(-) A-I      intronic chr14:64171782(-) A-I      intronic chr14:64190693(-) A-I      intronic chr14:64190626(-) A-I      intronic chr14:64167796(-) A-I      intronic chr14:64175238(-) A-I      intronic chr14:64190374(-) A-I      intronic chr14:64167827(-) A-I      intronic chr14:64171317(-) A-I      intronic chr14:64185942(-) A-I      intronic chr14:64171750(-) A-I      intronic chr14:64171737(-) A-I      intronic chr14:64167845(-) A-I      intronic chr14:64171723(-) A-I      intronic chr14:64167861(-) A-I      intronic chr14:64167866(-) A-I      intronic chr14:64162395(-) A-I      intronic chr14:64167904(-) A-I      intronic chr14:64167925(-) A-I      intronic chr14:64167942(-) A-I      intronic chr14:64171388(-) A-I      intronic chr14:64162849(-) A-I      intronic chr14:64190380(-) A-I      intronic chr14:64190257(-) A-I      intronic chr14:64171376(-) A-I      intronic chr14:64170836(-) A-I      intronic chr14:64169216(-) A-I      intronic chr14:64190254(-) A-I      intronic chr14:64170794(-) A-I      intronic chr14:64159328(-) A-I      intronic chr14:64192010(-) A-I      intronic chr14:64190245(-) A-I      intronic chr14:64183090(-) A-I      intronic chr14:64153993(-) A-I      intronic chr14:64169224(-) A-I      intronic chr14:64157567(-) A-I      intronic chr14:64170758(-) A-I      intronic chr14:64190825(-) A-I      intronic chr14:64170324(-) A-I      intronic chr14:64170199(-) A-I      intronic chr14:64159340(-) A-I      intronic chr14:64169225(-) A-I      intronic chr14:64169352(-) A-I      intronic chr14:64169365(-) A-I      intronic chr14:64169366(-) A-I      intronic chr14:64169371(-) A-I      intronic chr14:64179416(-) A-I      intronic chr14:64175196(-) A-I      intronic chr14:64190204(-) A-I      intronic chr14:64185924(-) A-I      intronic chr14:64169382(-) A-I      intronic chr14:64177951(-) A-I      intronic chr14:64169426(-) A-I      intronic chr14:64187260(-) A-I      intronic chr14:64189646(-) A-I      intronic chr14:64189643(-) A-I      intronic chr14:64170138(-) A-I      intronic chr14:64189614(-) A-I      intronic chr14:64190724(-) A-I      intronic chr14:64167921(-) A-I      intronic chr14:64156258(-) A-I      intronic chr14:64189595(-) A-I      intronic chr14:64189566(-) A-I      intronic chr14:64189454(-) A-I      intronic chr14:64153933(-) A-I      intronic chr14:64153936(-) A-I      intronic chr14:64153937(-) A-I      intronic chr14:64153941(-) A-I      intronic chr14:64153967(-) A-I      intronic chr14:64154011(-) A-I      intronic chr14:64154047(-) A-I      intronic chr14:64170817(-) A-I      intronic chr14:64179501(-) A-I      intronic chr14:64154050(-) A-I      intronic chr14:64184313(-) A-I      intronic chr14:64155453(-) A-I      intronic chr14:64189121(-) A-I      intronic chr14:64188998(-) A-I      intronic chr14:64188105(-) A-I      intronic chr14:64155478(-) A-I      intronic chr14:64155516(-) A-I      intronic chr14:64155523(-) A-I      intronic chr14:64178543(-) A-I      intronic chr14:64181818(-) A-I      intronic chr14:64188080(-) A-I      intronic chr14:64155551(-) A-I      intronic chr14:64155596(-) A-I      intronic chr14:64155620(-) A-I      intronic chr14:64187778(-) A-I      intronic chr14:64155634(-) A-I      intronic chr14:64171696(-) A-I      intronic chr14:64187776(-) A-I      intronic chr14:64155644(-) A-I      intronic chr14:64191971(-) A-I      intronic chr14:64187714(-) A-I      intronic chr14:64187415(-) A-I      intronic chr14:64155668(-) A-I      intronic chr14:64157675(-) A-I      intronic chr14:64187396(-) A-I      intronic chr14:64170622(-) A-I      intronic chr14:64156083(-) A-I      intronic chr14:64187346(-) A-I      intronic chr14:64159821(-) A-I      intronic chr14:64156121(-) A-I      intronic chr14:64156298(-) A-I      intronic chr14:64156349(-) A-I      intronic chr14:64156352(-) A-I      intronic chr14:64156374(-) A-I      intronic chr14:64156395(-) A-I      intronic chr14:64187218(-) A-I      intronic chr14:64156407(-) A-I      intronic chr14:64156431(-) A-I      intronic chr14:64187214(-) A-I      intronic chr14:64156446(-) A-I      intronic chr14:64191898(-) A-I      intronic chr14:64169381(-) A-I      intronic chr14:64156271(-) A-I      intronic chr14:64183181(-) A-I      intronic chr14:64154095(-) A-I      intronic chr14:64190887(-) A-I      intronic chr14:64192009(-) A-I      intronic chr14:64184880(-) A-I      intronic chr14:64162896(-) A-I      intronic chr14:64175195(-) A-I      intronic chr14:64190698(-) A-I      intronic chr14:64156116(-) A-I      intronic chr14:64162622(-) A-I      intronic chr14:64175176(-) A-I      intronic chr14:64185927(-) A-I      intronic chr14:64174436(-) A-I      intronic chr14:64159265(-) A-I      intronic chr14:64160945(-) A-I      intronic chr14:64186963(-) A-I      intronic chr14:64186758(-) A-I      intronic chr14:64188102(-) A-I      intronic chr14:64173535(-) A-I      intronic chr14:64160447(-) A-I      intronic chr14:64155502(-) A-I      intronic chr14:64157592(-) A-I      intronic chr14:64186901(-) A-I      intronic chr14:64184221(-) A-I      intronic chr14:64166819(-) A-I      intronic chr14:64153971(-) A-I      intronic chr14:64189262(-) A-I      intronic chr14:64156484(-) A-I      intronic chr14:64173678(-) A-I      intronic chr14:64184137(-) A-I      intronic chr14:64154114(-) A-I      intronic chr14:64175900(-) A-I      intronic chr14:64173558(-) A-I      intronic chr14:64156469(-) A-I      intronic chr14:64167920(-) A-I      intronic chr14:64175066(-) A-I      intronic chr14:64190354(-) A-I      intronic chr14:64157606(-) A-I      intronic chr14:64181988(-) A-I      intronic chr14:64160405(-) A-I      intronic chr14:64189044(-) A-I      intronic chr14:64191653(-) A-I      intronic chr14:64160892(-) A-I      intronic chr14:64153902(-) A-I      intronic chr14:64185883(-) A-I      intronic chr14:64174437(-) A-I      intronic chr14:64183575(-) A-I      intronic chr14:64178531(-) A-I      intronic chr14:64186911(-) A-I      intronic chr14:64172355(-) A-I      intronic chr14:64175227(-) A-I      intronic chr14:64160448(-) A-I      intronic chr14:64175970(-) A-I      intronic chr14:64174319(-) A-I      intronic chr14:64156896(-) A-I      intronic chr14:64173726(-) A-I      intronic chr14:64177960(-) A-I      intronic chr14:64153896(-) A-I      intronic chr14:64153914(-) A-I      intronic chr14:64170636(-) A-I      intronic chr14:64159342(-) A-I      intronic chr14:64184074(-) A-I      intronic chr14:64162394(-) A-I      intronic chr14:64183549(-) A-I      intronic chr14:64155614(-) A-I      intronic chr14:64154028(-) A-I      intronic chr14:64189578(-) A-I      intronic chr14:64175185(-) A-I      intronic chr14:64169255(-) A-I      intronic chr14:64186762(-) A-I      intronic chr14:64190305(-) A-I      intronic chr14:64160935(-) A-I      intronic chr14:64185774(-) A-I      intronic chr14:64183103(-) A-I      intronic chr14:64184854(-) A-I      intronic chr14:64169262(-) A-I      intronic chr14:64182006(-) A-I      intronic chr14:64181277(-) A-I      intronic chr14:64190830(-) A-I      intronic chr14:64159389(-) A-I      intronic chr14:64156392(-) A-I      intronic chr14:64173712(-) A-I      intronic chr14:64162629(-) A-I      intronic chr14:64174383(-) A-I      intronic chr14:64185773(-) A-I      intronic chr14:64179552(-) A-I      intronic chr14:64188062(-) A-I      intronic chr14:64190325(-) A-I      intronic chr14:64183604(-) A-I      intronic chr14:64175901(-) A-I      intronic chr14:64190760(-) A-I      intronic chr14:64189607(-) A-I      intronic chr14:64189654(-) A-I      intronic chr14:64162971(-) A-I      intronic chr14:64162561(-) A-I      intronic chr14:64157525(-) A-I      intronic chr14:64181124(-) A-I      intronic chr14:64170772(-) A-I      intronic chr14:64184136(-) A-I      intronic chr14:64160421(-) A-I      intronic chr14:64184792(-) A-I      intronic chr14:64181541(-) A-I      intronic chr14:64179759(-) A-I      intronic chr14:64154136(-) A-I      intronic chr14:64175919(-) A-I      intronic chr14:64155578(-) A-I      intronic chr14:64157646(-) A-I      intronic chr14:64179478(-) A-I      intronic chr14:64176040(-) A-I      intronic chr14:64186732(-) A-I      intronic chr14:64187739(-) A-I      intronic chr14:64184178(-) A-I      intronic chr14:64190315(-) A-I      intronic chr14:64154002(-) A-I      intronic chr14:64154899(-) A-I      intronic chr14:64166743(-) A-I      intronic chr14:64190764(-) A-I      intronic chr14:64162463(-) A-I      intronic chr14:64181835(-) A-I      intronic chr14:64187732(-) A-I      intronic chr14:64156149(-) A-I      intronic chr14:64192016(-) A-I      intronic chr14:64155536(-) A-I      intronic chr14:64159436(-) A-I      intronic chr14:64190865(-) A-I      intronic chr14:64156120(-) A-I      intronic chr14:64175045(-) A-I      intronic chr14:64160909(-) A-I      intronic chr14:64162503(-) A-I      intronic chr14:64175002(-) A-I      intronic chr14:64160739(-) A-I      intronic chr14:64185889(-) A-I      intronic chr14:64156979(-) A-I      intronic chr14:64183351(-) A-I      intronic chr14:64155477(-) A-I      intronic chr14:64175224(-) A-I      intronic chr14:64170796(-) A-I      intronic chr14:64178600(-) A-I      intronic chr14:64156468(-) A-I      intronic chr14:64183329(-) A-I      intronic chr14:64184930(-) A-I      intronic chr14:64179743(-) A-I      intronic chr14:64173661(-) A-I      intronic chr14:64156351(-) A-I      intronic chr14:64154076(-) A-I      intronic chr14:64170782(-) A-I      intronic chr14:64186002(-) A-I      intronic chr14:64190721(-) A-I      intronic chr14:64178556(-) A-I      intronic chr14:64190638(-) A-I      intronic chr14:64162577(-) A-I      intronic chr14:64159443(-) A-I      intronic chr14:64159445(-) A-I      intronic chr14:64183143(-) A-I      intronic chr14:64179415(-) A-I      intronic chr14:64156089(-) A-I      intronic chr14:64174410(-) A-I      intronic chr14:64156988(-) A-I      intronic chr14:64190182(-) A-I      intronic chr14:64175111(-) A-I      intronic chr14:64162400(-) A-I      intronic chr14:64183063(-) A-I      intronic chr14:64160741(-) A-I      intronic chr14:64172372(-) A-I      intronic chr14:64178530(-) A-I      intronic chr14:64159924(-) A-I      intronic chr14:64159702(-) A-I      intronic chr14:64175112(-) A-I      intronic chr14:64159332(-) A-I      intronic chr14:64155568(-) A-I      intronic chr14:64187395(-) A-I      intronic chr14:64187873(-) A-I      intronic chr14:64170826(-) A-I      intronic chr14:64173645(-) A-I      intronic chr14:64170284(-) A-I      intronic chr14:64155711(-) A-I      intronic chr14:64156402(-) A-I      intronic chr14:64182982(-) A-I      intronic chr14:64154075(-) A-I      intronic chr14:64160511(-) A-I      intronic chr14:64190814(-) A-I      intronic chr14:64159811(-) A-I      intronic chr14:64155604(-) A-I      intronic chr14:64159425(-) A-I      intronic chr14:64159222(-) A-I      intronic chr14:64181700(-) A-I      intronic chr14:64153954(-) A-I      intronic chr14:64177965(-) A-I      intronic chr14:64160970(-) A-I      intronic chr14:64170288(-) A-I      intronic chr14:64159236(-) A-I      intronic chr14:64156414(-) A-I      intronic chr14:64156882(-) A-I      intronic chr14:64156978(-) A-I      intronic chr14:64159854(-) A-I      intronic chr14:64159369(-) A-I      intronic chr14:64156954(-) A-I      intronic chr14:64167790(-) A-I      intronic chr14:64189590(-) A-I      intronic chr14:64187712(-) A-I      intronic chr14:64169420(-) A-I      intronic chr14:64169210(-) A-I      intronic chr14:64156432(-) A-I      intronic chr14:64183032(-) A-I      intronic chr14:64178498(-) A-I      intronic chr14:64183104(-) A-I      intronic chr14:64183605(-) A-I      intronic chr14:64162897(-) A-I      intronic chr14:64181870(-) A-I      intronic chr14:64156285(-) A-I      intronic chr14:64192006(-) A-I      intronic chr14:64170688(-) A-I      intronic chr14:64160826(-) A-I      intronic chr14:64175177(-) A-I      intronic chr14:64160880(-) A-I      intronic chr14:64187308(-) A-I      intronic chr14:64189581(-) A-I      intronic chr14:64183129(-) A-I      intronic chr14:64160566(-) A-I      intronic chr14:64175071(-) A-I      intronic chr14:64189676(-) A-I      intronic chr14:64187232(-) A-I      intronic chr14:64156914(-) A-I      intronic chr14:64170744(-) A-I      intronic chr14:64185877(-) A-I      intronic chr14:64184172(-) A-I      intronic chr14:64179761(-) A-I      intronic chr14:64155545(-) A-I      intronic chr14:64185861(-) A-I      intronic chr14:64157712(-) A-I      intronic chr14:64155537(-) A-I      intronic chr14:64154065(-) A-I      intronic chr14:64159260(-) A-I      intronic chr14:64157706(-) A-I      intronic chr14:64170690(-) A-I      intronic chr14:64175980(-) A-I      intronic chr14:64159339(-) A-I      intronic chr14:64170818(-) A-I      intronic chr14:64187749(-) A-I      intronic chr14:64188040(-) A-I      intronic chr14:64187774(-) A-I      intronic chr14:64153987(-) A-I      intronic chr14:64179549(-) A-I      intronic chr14:64162426(-) A-I      intronic chr14:64159917(-) A-I      intronic chr14:64185822(-) A-I      intronic chr14:64179483(-) A-I      intronic chr14:64185842(-) A-I      intronic chr14:64154089(-) A-I      intronic chr14:64187285(-) A-I      intronic chr14:64159923(-) A-I      intronic chr14:64156270(-) A-I      intronic chr14:64166778(-) A-I      intronic chr14:64183657(-) A-I      intronic chr14:64185995(-) A-I      intronic chr14:64170191(-) A-I      intronic chr14:64181896(-) A-I      intronic chr14:64178582(-) A-I      intronic chr14:64187765(-) A-I      intronic chr14:64170682(-) A-I      intronic chr14:64185857(-) A-I      intronic chr14:64160583(-) A-I      intronic chr14:64154019(-) A-I      intronic chr14:64170723(-) A-I      intronic chr14:64176010(-) A-I      intronic chr14:64190289(-) A-I      intronic chr14:64183683(-) A-I      intronic chr14:64169414(-) A-I      intronic chr14:64171323(-) A-I      intronic chr14:64188067(-) A-I      intronic chr14:64157557(-) A-I      intronic chr14:64157514(-) A-I      intronic chr14:64157612(-) A-I      intronic chr14:64188079(-) A-I      intronic chr14:64179572(-) A-I      intronic chr14:64192035(-) A-I      intronic chr14:64155623(-) A-I      intronic chr14:64183544(-) A-I      intronic chr14:64156452(-) A-I      intronic chr14:64176009(-) A-I      intronic chr14:64155712(-) A-I      intronic chr14:64160504(-) A-I      intronic chr14:64183064(-) A-I      intronic chr14:64154010(-) A-I      intronic chr14:64152514(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SGPP1	chr14:64152514(-) A-I exon 3'UTR    22327324 chr14:64156270(-) A-I intron -    22327324 chr14:64156484(-) A-I intron -    22327324 chr14:64156896(-) A-I intron -    22327324 chr14:64162395(-) A-I intron -    22327324 chr14:64190734(-) A-I intron -    22327324 chr14:64181124(-) A-G intron -    22484847 chr14:64154002(-) A-G intron -    22484847 chr14:64154136(-) A-G intron -    22484847 chr14:64155502(-) A-G intron -    22484847 chr14:64156120(-) A-G intron -    22484847 chr14:64156484(-) A-G intron -    22484847 chr14:64156886(-) A-G intron -    22484847 chr14:64156896(-) A-G intron -    22484847 chr14:64156954(-) A-G intron -    22484847 chr14:64159260(-) A-G intron -    22484847 chr14:64160583(-) A-G intron -    22484847 chr14:64160929(-) A-G intron -    22484847 chr14:64160970(-) A-G intron -    22484847 chr14:64162395(-) A-G intron -    22484847 chr14:64162629(-) A-G intron -    22484847 chr14:64166743(-) A-G intron -    22484847 chr14:64179415(-) A-G intron -    22484847 chr14:64181700(-) A-G intron -    22484847 chr14:64181818(-) A-G intron -    22484847 chr14:64181988(-) A-G intron -    22484847 chr14:64183549(-) A-G intron -    22484847 chr14:64184221(-) A-G intron -    22484847 chr14:64190797(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SGPP1	chr14:64152912-64152913(-) m6A CDS       22608085 chr14:64152930-64152931(-) m6A CDS       22608085 chr14:64153195-64153196(-) m6A CDS       24284625//24209618//24981863//22608085 chr14:64153289-64153290(-) m6A CDS       24284625//24981863 chr14:64153312-64153313(-) m6A CDS       24284625//24981863 chr14:64165358-64165359(-) m6A CDS       24284625//24209618//24981863 chr14:64194126-64194127(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085 chr14:64194195-64194196(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr14:64194201-64194202(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr14:64194239-64194240(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr14:64194507-64194508(-) m6A CDS       25456834//27371828//27773536 chr14:64194549-64194550(-) m6A CDS       24284625//25456834//24981863//27371828//27773536 chr14:64194615-64194616(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536 chr14:64194714-64194715(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SGPP1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: SGPP1

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	cRep//miRanda//PARalyzer//Targetscan
Support Database	RepTar//ViRBase//VIRmiRNA//VmiReg

References:

PMID	22100165	Target region	3'UTR
Source	RepTar//ViRBase//VIRmiRNA//VmiReg	Interactor1 expression	None
Tissue or cell line	BC-1 cells	Interactor2 expression	Downregulation
Description	Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites.Clusters with seed matches to expressed miRNAs were considered candidate target sites. Of the clusters mapping to human 3'UTRs, 69% (BC-1) and 70% (BC-3) had seed matches to expressed miRNAs (Tables S6).Table S6A BC-1 derived 3'UTR clusters with seed matches to expressed miRNAs.