Basic Information:

  VIRBase ID:  

VHID00349281

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          SLC24A3:  NM_020689     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	SLC24A3
miRBase Accession/Entrez ID	MIMAT0003424	57419
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	NCKX3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC24A3	chr20:19692785(+) A-I      intronic chr20:19692792(+) A-I      intronic chr20:19692795(+) A-I      intronic chr20:19694837(+) A-I      intronic chr20:19694846(+) A-I      intronic chr20:19694851(+) A-I      intronic chr20:19555781(+) A-I      intronic chr20:19305999(+) A-I      intronic chr20:19317204(+) A-I      intronic chr20:19317230(+) A-I      intronic chr20:19317109(+) A-I      intronic chr20:19692877(+) A-I      intronic chr20:19581525(+) A-I      intronic chr20:19646984(+) A-I      intronic chr20:19305979(+) A-I      intronic chr20:19557825(+) A-I      intronic chr20:19692778(+) A-I      intronic chr20:19317110(+) A-I      intronic chr20:19692690(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC24A3	chr20:19665855-19665856(+) m6A CDS       25456834 chr20:19665872-19665873(+) m6A CDS       25456834//24981863 chr20:19665911-19665912(+) m6A CDS       25456834//24981863 chr20:19665930-19665931(+) m6A CDS       25456834//24981863 chr20:19702010-19702011(+) m6A 3'UTR       24981863 chr20:19702050-19702051(+) m6A 3'UTR       25456834//24981863 chr20:19702073-19702074(+) m6A 3'UTR       25456834//24981863 chr20:19702148-19702149(+) m6A 3'UTR       24981863 chr20:19702171-19702172(+) m6A 3'UTR       - chr20:19702821-19702822(+) m6A 3'UTR       - chr20:19702912-19702913(+) m6A 3'UTR       25456834 chr20:19703020-19703021(+) m6A 3'UTR       25456834//24981863 chr20:19703027-19703028(+) m6A 3'UTR       25456834//24981863 chr20:19703042-19703043(+) m6A 3'UTR       25456834//24981863 chr20:19703065-19703066(+) m6A 3'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC24A3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: SLC24A3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg