Basic Information:

  VIRBase ID:  

VHID00348135

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          MAP4K4:  NR_169281     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	MAP4K4
miRBase Accession/Entrez ID	MIMAT0003424	9448
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FLH21957//HEL-S-31//HGK//MEKKK4//NIK

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAP4K4	chr2:102377276(+) A-I      intronic chr2:102377246(+) A-I      intronic chr2:102461891(+) A-I      intronic chr2:102319896(+) A-I      intronic chr2:102464560(+) A-I      intronic chr2:102464532(+) A-I      intronic chr2:102464507(+) A-I      intronic chr2:102462012(+) A-I      intronic chr2:102462009(+) A-I      intronic chr2:102492388(+) A-I      intronic chr2:102462378(+) A-I      intronic chr2:102461965(+) A-I      intronic chr2:102461960(+) A-I      intronic chr2:102461953(+) A-I      intronic chr2:102461943(+) A-I      intronic chr2:102461932(+) A-I      intronic chr2:102461925(+) A-I      intronic chr2:102461923(+) A-I      intronic chr2:102464493(+) A-I      intronic chr2:102461888(+) A-I      intronic chr2:102461882(+) A-I      intronic chr2:102462084(+) A-I      intronic chr2:102461958(+) A-I      intronic chr2:102461899(+) A-I      intronic chr2:102510132(+) A-I      3'UTR chr2:102377310(+) A-I      intronic chr2:102377304(+) A-I      intronic chr2:102377289(+) A-I      intronic chr2:102320366(+) A-I      intronic chr2:102320362(+) A-I      intronic chr2:102320297(+) A-I      intronic chr2:102320289(+) A-I      intronic chr2:102318924(+) A-I      intronic chr2:102318911(+) A-I      intronic chr2:102495542(+) A-I      intronic chr2:102466237(+) A-I      intronic chr2:102466230(+) A-I      intronic chr2:102465871(+) A-I      intronic chr2:102465853(+) A-I      intronic chr2:102465843(+) A-I      intronic chr2:102427718(+) A-I      intronic chr2:102427682(+) A-I      intronic chr2:102427681(+) A-I      intronic chr2:102427586(+) A-I      intronic chr2:102421416(+) A-I      intronic chr2:102421415(+) A-I      intronic chr2:102376871(+) A-I      intronic chr2:102376356(+) A-I      intronic chr2:102376337(+) A-I      intronic chr2:102349131(+) A-I      intronic chr2:102349071(+) A-I      intronic chr2:102349069(+) A-I      intronic chr2:102348045(+) A-I      intronic chr2:102348044(+) A-I      intronic chr2:102348040(+) A-I      intronic chr2:102347996(+) A-I      intronic chr2:102345216(+) A-I      intronic chr2:102345201(+) A-I      intronic chr2:102345074(+) A-I      intronic chr2:102344337(+) A-I      intronic chr2:102344310(+) A-I      intronic chr2:102344308(+) A-I      intronic chr2:102344278(+) A-I      intronic chr2:102336415(+) A-I      intronic chr2:102336359(+) A-I      intronic chr2:102336327(+) A-I      intronic chr2:102336315(+) A-I      intronic chr2:102336273(+) A-I      intronic chr2:102336259(+) A-I      intronic chr2:102336258(+) A-I      intronic chr2:102334667(+) A-I      intronic chr2:102330245(+) A-I      intronic chr2:102330241(+) A-I      intronic chr2:102330235(+) A-I      intronic chr2:102330201(+) A-I      intronic chr2:102330181(+) A-I      intronic chr2:102330180(+) A-I      intronic chr2:102329979(+) A-I      intronic chr2:102329856(+) A-I      intronic chr2:102329807(+) A-I      intronic chr2:102329178(+) A-I      intronic chr2:102329079(+) A-I      intronic chr2:102329055(+) A-I      intronic chr2:102321219(+) A-I      intronic chr2:102321114(+) A-I      intronic chr2:102321078(+) A-I      intronic chr2:102320442(+) A-I      intronic chr2:102421321(+) A-I      intronic chr2:102345037(+) A-I      intronic chr2:102318894(+) A-I      intronic chr2:102376369(+) A-I      intronic chr2:102494418(+) A-I      intronic chr2:102318457(+) A-I      intronic chr2:102348196(+) A-I      intronic chr2:102336353(+) A-I      intronic chr2:102329427(+) A-I      intronic chr2:102319933(+) A-I      intronic chr2:102495536(+) A-I      intronic chr2:102376742(+) A-I      intronic chr2:102336684(+) A-I      intronic chr2:102495611(+) A-I      intronic chr2:102347449(+) A-I      intronic chr2:102329938(+) A-I      intronic chr2:102320272(+) A-I      intronic chr2:102330179(+) A-I      intronic chr2:102321187(+) A-I      intronic chr2:102362506(+) A-I      intronic chr2:102377280(+) A-I      intronic chr2:102345146(+) A-I      intronic chr2:102421448(+) A-I      intronic chr2:102347971(+) A-I      intronic chr2:102320326(+) A-I      intronic chr2:102409227(+) A-I      intronic chr2:102345084(+) A-I      intronic chr2:102427686(+) A-I      intronic chr2:102344273(+) A-I      intronic chr2:102321161(+) A-I      intronic chr2:102336196(+) A-I      intronic chr2:102376375(+) A-I      intronic chr2:102427680(+) A-I      intronic chr2:102378082(+) A-I      intronic chr2:102321115(+) A-I      intronic chr2:102348138(+) A-I      intronic chr2:102382022(+) A-I      intronic chr2:102320025(+) A-I      intronic chr2:102376857(+) A-I      intronic chr2:102318562(+) A-I      intronic chr2:102465865(+) A-I      intronic chr2:102495514(+) A-I      intronic chr2:102318470(+) A-I      intronic chr2:102318809(+) A-I      intronic chr2:102495558(+) A-I      intronic chr2:102321151(+) A-I      intronic chr2:102348133(+) A-I      intronic chr2:102320393(+) A-I      intronic chr2:102427753(+) A-I      intronic chr2:102318467(+) A-I      intronic chr2:102347839(+) A-I      intronic chr2:102319901(+) A-I      intronic chr2:102344230(+) A-I      intronic chr2:102465714(+) A-I      intronic chr2:102376491(+) A-I      intronic chr2:102377411(+) A-I      intronic chr2:102327891(+) A-I      intronic chr2:102375583(+) A-I      intronic chr2:102318927(+) A-I      intronic chr2:102345098(+) A-I      intronic chr2:102330093(+) A-I      intronic chr2:102458203(+) A-I      intronic chr2:102347326(+) A-I      intronic chr2:102332656(+) A-I      intronic chr2:102376505(+) A-I      intronic chr2:102427848(+) A-I      intronic chr2:102345195(+) A-I      intronic chr2:102376493(+) A-I      intronic chr2:102377344(+) A-I      intronic chr2:102336821(+) A-I      intronic chr2:102329654(+) A-I      intronic chr2:102377279(+) A-I      intronic chr2:102332651(+) A-I      intronic chr2:102320005(+) A-I      intronic chr2:102373264(+) A-I      intronic chr2:102321224(+) A-I      intronic chr2:102466277(+) A-I      intronic chr2:102427563(+) A-I      intronic chr2:102378293(+) A-I      intronic chr2:102321099(+) A-I      intronic chr2:102377211(+) A-I      intronic chr2:102319960(+) A-I      intronic chr2:102347332(+) A-I      intronic chr2:102329801(+) A-I      intronic chr2:102465813(+) A-I      intronic chr2:102319889(+) A-I      intronic chr2:102318845(+) A-I      intronic chr2:102345242(+) A-I      intronic chr2:102319902(+) A-I      intronic chr2:102345117(+) A-I      intronic chr2:102338121(+) A-I      intronic chr2:102318881(+) A-I      intronic chr2:102345056(+) A-I      intronic chr2:102318884(+) A-I      intronic chr2:102348022(+) A-I      intronic chr2:102336429(+) A-I      intronic chr2:102427712(+) A-I      intronic chr2:102345051(+) A-I      intronic chr2:102372532(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MAP4K4	chr2:102486180(+) A-I exon CDS    19478186 chr2:102320272(+) A-G intron -    22484847 chr2:102320326(+) A-G intron -    22484847 chr2:102321099(+) A-G intron -    22484847 chr2:102321224(+) A-G intron -    22484847 chr2:102344269(+) A-G intron -    22484847 chr2:102344272(+) A-G intron -    22484847 chr2:102344273(+) A-G intron -    22484847 chr2:102345051(+) A-G intron -    22484847 chr2:102345056(+) A-G intron -    22484847 chr2:102345084(+) A-G intron -    22484847 chr2:102345098(+) A-G intron -    22484847 chr2:102345195(+) A-G intron -    22484847 chr2:102347326(+) A-G intron -    22484847 chr2:102376772(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAP4K4	chr2:102314502-102314503(+) m6A 5'UTR//intron       - chr2:102314576-102314577(+) m6A 5'UTR//CDS       22575960 chr2:102314987-102314988(+) m6A 5'UTR//CDS       27773535 chr2:102441817-102441818(+) m6A CDS//exon       - chr2:102441829-102441830(+) m6A CDS//exon       27773535 chr2:102441841-102441842(+) m6A CDS//exon       27773535 chr2:102441856-102441857(+) m6A CDS//exon       27773535 chr2:102445967-102445968(+) m6A CDS//exon       27773535 chr2:102446051-102446052(+) m6A CDS//exon       - chr2:102456361-102456362(+) m6A CDS//exon//intron       24981863//27773535 chr2:102456440-102456441(+) m1A CDS//exon//intron       26863196 chr2:102459075-102459076(+) m6A CDS//exon       24209618//24981863//27773535 chr2:102459106-102459107(+) m1A CDS//exon       26863196 chr2:102459125-102459126(+) m6A CDS//exon       24209618//24981863//27773535 chr2:102460613-102460614(+) m6A CDS//exon       24209618//24981863//27773535 chr2:102460627-102460628(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr2:102460655-102460656(+) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr2:102460724-102460725(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr2:102460751-102460752(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:102472482-102472483(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:102472497-102472498(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr2:102472547-102472548(+) m1A CDS//exon       26863196 chr2:102472571-102472572(+) m1A CDS//exon       26863196 chr2:102472596-102472597(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr2:102476172-102476173(+) m6A CDS//intron       24284625//24209618 chr2:102476351-102476352(+) m6A exon//intron       24284625 chr2:102478692-102478693(+) m6A exon//intron       - chr2:102484473-102484474(+) m6A exon//intron       - chr2:102486150-102486151(+) m6A CDS//exon       24981863//22575960 chr2:102486238-102486239(+) m6A CDS//exon       - chr2:102486246-102486247(+) m6A CDS//exon       - chr2:102486799-102486800(+) m6A CDS//exon       - chr2:102488117-102488118(+) m6A CDS//intron       24284625//24981863 chr2:102488127-102488128(+) m6A CDS//intron       24284625//24981863 chr2:102490137-102490138(+) m6A CDS       24284625//24981863//26404942 chr2:102490172-102490173(+) m6A CDS       24981863//26404942 chr2:102490207-102490208(+) m6A CDS       24981863//26404942 chr2:102490568-102490569(+) m6A CDS       26404942 chr2:102493509-102493510(+) m6A CDS       26404942 chr2:102504336-102504337(+) m6A CDS       26404942//27773535 chr2:102505277-102505278(+) m6A CDS       27773535 chr2:102505322-102505323(+) m6A CDS       27773535 chr2:102507690-102507691(+) m6A CDS       25456834//24981863 chr2:102507763-102507764(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr2:102507814-102507815(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr2:102507830-102507831(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr2:102508007-102508008(+) m6A 3'UTR       24209618//24981863//27773535//22608085 chr2:102508084-102508085(+) m6A 3'UTR       24209618//24981863//27773535//22608085 chr2:102508234-102508235(+) m6A 3'UTR       24209618//24981863//27773535//22608085 chr2:102508243-102508244(+) m1A 3'UTR       26863196 chr2:102508396-102508397(+) m6A 3'UTR       27773535 chr2:102508527-102508528(+) m6A 3'UTR       27773535 chr2:102508584-102508585(+) m6A 3'UTR       27773535 chr2:102509985-102509986(+) m6A 3'UTR       24981863 chr2:102510033-102510034(+) m6A 3'UTR       24981863 chr2:102510103-102510104(+) m6A 3'UTR       24981863 chr2:102511035-102511036(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MAP4K4	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: MAP4K4

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg