Basic Information:

  VIRBase ID:  

VHID00347203

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          GADD45A:  NM_001924     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	GADD45A
miRBase Accession/Entrez ID	MIMAT0003424	1647
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DDIT1//GADD45

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GADD45A	chr1:68151213-68151214(+) m6A CDS//exon       24209618 chr1:68151361-68151362(+) m6A exon//intron       24209618 chr1:68151383-68151384(+) m6A exon//intron       24209618 chr1:68151682-68151683(+) m6A exon//intron       24981863 chr1:68153481-68153482(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr1:68153562-68153563(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:68153669-68153670(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:68153691-68153692(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:68153707-68153708(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:68153724-68153725(+) m6A 3'UTR       24209618//24981863//27773535//22608085 chr1:68153765-68153766(+) m6A 3'UTR       24981863//27773535//22608085 chr1:68153867-68153868(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GADD45A	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: GADD45A

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg