Basic Information:

  VIRBase ID:  

VHID00347008

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          ACADS:  NM_001302554     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	ACADS
miRBase Accession/Entrez ID	MIMAT0003424	35
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ACAD3//SCAD

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ACADS	chr12:121167915(+) A-I      intronic chr12:121173548(+) A-I      intronic chr12:121173549(+) A-I      intronic chr12:121173546(+) A-I      intronic chr12:121173542(+) A-I      intronic chr12:121167911(+) A-I      intronic chr12:121173582(+) A-I      intronic chr12:121172990(+) A-I      intronic chr12:121173092(+) A-I      intronic chr12:121172574(+) A-I      intronic chr12:121174019(+) A-I      intronic chr12:121173000(+) A-I      intronic chr12:121165879(+) A-I      intronic chr12:121165902(+) A-I      intronic chr12:121171630(+) A-I      intronic chr12:121171632(+) A-I      intronic chr12:121171634(+) A-I      intronic chr12:121172694(+) A-I      intronic chr12:121172700(+) A-I      intronic chr12:121173058(+) A-I      intronic chr12:121173581(+) A-I      intronic chr12:121172995(+) A-I      intronic chr12:121172877(+) A-I      intronic chr12:121173449(+) A-I      intronic chr12:121167986(+) A-I      intronic chr12:121172910(+) A-I      intronic chr12:121173575(+) A-I      intronic chr12:121172867(+) A-I      intronic chr12:121167839(+) A-I      intronic chr12:121168058(+) A-I      intronic chr12:121172654(+) A-I      intronic chr12:121172502(+) A-I      intronic chr12:121173537(+) A-I      intronic chr12:121174046(+) A-I      intronic chr12:121173448(+) A-I      intronic chr12:121173501(+) A-I      intronic chr12:121172868(+) A-I      intronic chr12:121167969(+) A-I      intronic chr12:121172919(+) A-I      intronic chr12:121173621(+) A-I      intronic chr12:121172791(+) A-I      intronic chr12:121173622(+) A-I      intronic chr12:121173544(+) A-I      intronic chr12:121174059(+) A-I      intronic chr12:121167925(+) A-I      intronic chr12:121173500(+) A-I      intronic chr12:121172648(+) A-I      intronic chr12:121173540(+) A-I      intronic chr12:121172720(+) A-I      intronic chr12:121173426(+) A-I      intronic chr12:121172634(+) A-I      intronic chr12:121172899(+) A-I      intronic chr12:121172635(+) A-I      intronic chr12:121167983(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ACADS	chr12:121167969(+) A-G intron -    22484847 chr12:121173426(+) A-G intron -    22484847 chr12:121167839(+) A-G intron -    22484847 chr12:121172648(+) A-G intron -    22484847 chr12:121173500(+) A-G intron -    22484847 chr12:121173537(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ACADS	chr12:121163636-121163637(+) m6A 5'UTR//exon       24981863 chr12:121163672-121163673(+) m6A 5'UTR//exon       24981863 chr12:121177262-121177263(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr12:121177273-121177274(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr12:121177325-121177326(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr12:121177355-121177356(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ACADS	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: ACADS

Evidence Support:

Prediction-Evidence	PITA//RNAHybrid
Support Database	VmiReg