Basic Information:

  VIRBase ID:  

VHID00347004

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:  MIMAT0003424          DNAAF4-CCPG1:  NR_037923     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART13-3p	DNAAF4-CCPG1
miRBase Accession/Entrez ID	MIMAT0003424	100533483
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	lncRNA
Alias	-	DYX1C1-CCPG1

ncRNA SNP information:

Resource	Symbol	SNP ID	SNP Position	Ref/Alt	PMID
LincSNP 3.0	DNAAF4-CCPG1	rs7169460 chr15:55410093 A/G         19010793 rs16976351 chr15:55496634 C/T         19010793 rs7168869 chr15:55362050 C/T         19853236 rs2289323 chr15:55376883 C/G         20339536 rs16976296 chr15:55362206 C/G         20339536 rs16976298 chr15:55368028 C/T         20339536 rs2289324 chr15:55376938 G/T         20339536 rs11857139 chr15:55387056 A/G         20453842 rs11857862 chr15:55393169 A/G         20453842 rs11071183 chr15:55371091 C/T         20453842 rs8042509 chr15:55381760 C/T         20453842 rs8037376 chr15:55476123 C/T         20453842 rs685935 chr15:55478713 C/T         20453842 rs4144134 chr15:55477773 C/T         20453842 rs4380011 chr15:55377357 A/G         20502693 rs692646 chr15:55474589 A/G         20502693 rs7174641 chr15:55489800 C/T         20502693 rs17819096 chr15:55366450 G/T         20502693 rs8041044 chr15:55373115 A/C         20881960 rs16953240 chr15:55408783 A/C         20881960 rs11732 chr15:55355588 A/G         20881960 rs8027135 chr15:55361393 A/G         20881960 rs8031507 chr15:55358813 A/G         20881960 rs8042642 chr15:55360983 A/G         20881960 rs7164984 chr15:55382481 A/G         20881960 rs8029077 chr15:55408050 A/G         20881960 rs7162724 chr15:55394519 A/T         20881960 rs8028482 chr15:55377784 C/G         20881960 rs16976307 chr15:55376446 C/G         20881960 rs8029258 chr15:55408150 C/G         20881960 rs6493781 chr15:55377194 C/T         20881960 rs7168882 chr15:55362066 C/T         20881960 rs8041885 chr15:55372891 C/T         20881960 rs10518810 chr15:55373308 C/T         20881960 rs16976314 chr15:55377941 C/T         20881960 rs7170970 chr15:55410163 C/T         20881960 rs8034029 chr15:55420659 C/T         20881960 rs7181226 chr15:55437369 C/T         20881960 rs7181999 chr15:55467880 C/T         20881960 rs7177888 chr15:55375371 G/T         20881960 rs3759864 chr15:55430015 C/T         21829388 rs12907654 chr15:55498183 C/G         21909115 rs501231 chr15:55360833 A/G         22295056 rs493968 chr15:55371042 A/G         22295056 rs7169179 chr15:55395576 A/G         22295056 rs11071185 chr15:55402632 A/G         22295056 rs12148682 chr15:55404334 A/T         22295056 rs549914 chr15:55377586 C/A         22295056 rs472579 chr15:55376216 C/G         22295056 rs16976299 chr15:55368592 C/T         22295056 rs12324434 chr15:55422237 C/T         22295056 rs7169948 chr15:55395699 G/C         22295056 rs12440680 chr15:55390942 G/T         22295056 rs11637024 chr15:55397431 G/T         22295056 rs7170993 chr15:55395771 T/C         22295056 rs9920450 chr15:55401006 T/C         22295056 rs622097 chr15:55447640 T/C         22295056 rs600753 chr15:55466995 T/C         22295056 rs692690 chr15:55468324 T/C         22295056 rs3743204 chr15:55498112 G/T         22377632 rs687623 chr15:55438983 C/T         23455636 rs692691 chr15:55468377 C/T         23455636 rs8043049 chr15:55485590 C/T         23455636 rs4774768 chr15:55434307 G/T         23455636 rs692062 chr15:55480574 T/C         24483146

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DNAAF4-CCPG1	Chromatin K562 cells     - Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART13-3p
Interactor2: DNAAF4-CCPG1

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg