Detail Information

Basic Information:


  VIRBase ID:  

VHID00346991

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART13-3p:           KRT10-AS1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART13-3p KRT10-AS1
miRBase
Accession/Entrez ID
MIMAT0003424 147184
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA lncRNA
Alias - TMEM99

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KRT10-AS1
chr17:38988704(+) A-I      intronic
chr17:38988416(+) A-I      intronic
chr17:38988257(+) A-I      intronic
chr17:38988699(+) A-I      intronic
chr17:38988579(+) A-I      intronic
chr17:38988725(+) A-I      intronic
chr17:38988417(+) A-I      intronic
chr17:38988286(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KRT10-AS1
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART13-3p
Interactor2: KRT10-AS1

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

Starting a new search, please wait ...