Basic Information:

  VIRBase ID:  

VHID00346512

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART12:  MIMAT0003423          MAGI3:  NM_001142782     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART12	MAGI3
miRBase Accession/Entrez ID	MIMAT0003423	260425
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	dJ730K3.2//MAGI-3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MAGI3	chr1:113946994(+) A-I      intronic chr1:113947027(+) A-I      intronic chr1:113946165(+) A-I      intronic chr1:113946170(+) A-I      intronic chr1:114223442(+) A-I      intronic chr1:114223460(+) A-I      intronic chr1:113946174(+) A-I      intronic chr1:114223409(+) A-I      intronic chr1:113946171(+) A-I      intronic chr1:113966100(+) A-I      intronic chr1:114223464(+) A-I      intronic chr1:114223463(+) A-I      intronic chr1:114223405(+) A-I      intronic chr1:113946162(+) A-I      intronic chr1:114107230(+) A-I      intronic chr1:114159564(+) A-I      intronic chr1:113988088(+) A-I      intronic chr1:113991470(+) A-I      intronic chr1:113991619(+) A-I      intronic chr1:113991620(+) A-I      intronic chr1:114063325(+) A-I      intronic chr1:114086493(+) A-I      intronic chr1:114099427(+) A-I      intronic chr1:114223406(+) A-I      intronic chr1:114159567(+) A-I      intronic chr1:114081921(+) A-I      intronic chr1:114137828(+) A-I      intronic chr1:113966075(+) A-I      intronic chr1:114137822(+) A-I      intronic chr1:114137851(+) A-I      intronic chr1:114160919(+) A-I      intronic chr1:114154723(+) A-I      intronic chr1:114160916(+) A-I      intronic chr1:114099001(+) A-I      intronic chr1:114089052(+) A-I      intronic chr1:114102861(+) A-I      intronic chr1:114194138(+) A-I      intronic chr1:114099303(+) A-I      intronic chr1:114097548(+) A-I      intronic chr1:114160879(+) A-I      intronic chr1:114160828(+) A-I      intronic chr1:114099321(+) A-I      intronic chr1:113968091(+) A-I      intronic chr1:113991368(+) A-I      intronic chr1:114102889(+) A-I      intronic chr1:113988142(+) A-I      intronic chr1:114045886(+) A-I      intronic chr1:114099315(+) A-I      intronic chr1:114160848(+) A-I      intronic chr1:114223408(+) A-I      intronic chr1:114216867(+) A-I      intronic chr1:113948829(+) A-I      intronic chr1:114153399(+) A-I      intronic chr1:114223404(+) A-I      intronic chr1:114160772(+) A-I      intronic chr1:114160769(+) A-I      intronic chr1:114153732(+) A-I      intronic chr1:114099285(+) A-I      intronic chr1:114223407(+) A-I      intronic chr1:114102293(+) A-I      intronic chr1:114159554(+) A-I      intronic chr1:114222966(+) A-I      intronic chr1:114102382(+) A-I      intronic chr1:114081894(+) A-I      intronic chr1:114223678(+) A-I      intronic chr1:114153445(+) A-I      intronic chr1:114102885(+) A-I      intronic chr1:113991661(+) A-I      intronic chr1:114223018(+) A-I      intronic chr1:114223125(+) A-I      intronic chr1:113946918(+) A-I      intronic chr1:113946986(+) A-I      intronic chr1:114205759(+) A-I      intronic chr1:113946919(+) A-I      intronic chr1:113947014(+) A-I      intronic chr1:113946974(+) A-I      intronic chr1:114159641(+) A-I      intronic chr1:113968113(+) A-I      intronic chr1:114081900(+) A-I      intronic chr1:114047804(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MAGI3	chr1:114098388(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MAGI3	chr1:113933379-113933380(+) m6A 5'UTR       25456834//22608085 chr1:113946456-113946457(+) m6A exon//intron       24209618 chr1:114123273-114123274(+) m6A CDS//exon       24981863 chr1:114123318-114123319(+) m6A exon//intron       24981863 chr1:114123382-114123383(+) m6A exon//intron       24981863 chr1:114133167-114133168(+) m6A CDS       22608085 chr1:114133183-114133184(+) m6A CDS       22608085 chr1:114133212-114133213(+) m6A CDS       22608085 chr1:114133220-114133221(+) m6A CDS       22608085 chr1:114133234-114133235(+) m6A CDS       22608085 chr1:114184547-114184548(+) m6A CDS       24284625//22608085 chr1:114184631-114184632(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184688-114184689(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184719-114184720(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184741-114184742(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184806-114184807(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184836-114184837(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184896-114184897(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr1:114184965-114184966(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr1:114214425-114214426(+) m6A CDS       - chr1:114214454-114214455(+) m6A CDS       - chr1:114225567-114225568(+) m6A 3'UTR//CDS       22608085 chr1:114225683-114225684(+) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr1:114225891-114225892(+) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr1:114225939-114225940(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22608085 chr1:114226014-114226015(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr1:114226240-114226241(+) m6A 3'UTR//CDS       24284625//24981863//22608085 chr1:114226309-114226310(+) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr1:114226366-114226367(+) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr1:114226431-114226432(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226454-114226455(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226459-114226460(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226482-114226483(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226502-114226503(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226510-114226511(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226524-114226525(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr1:114226552-114226553(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr1:114226649-114226650(+) m6A 3'UTR       24284625//24981863//22608085 chr1:114226659-114226660(+) m6A 3'UTR       24284625//24981863//22608085 chr1:114226731-114226732(+) m6A 3'UTR       24284625//24981863//22608085 chr1:114226802-114226803(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:114226916-114226917(+) m6A 3'UTR       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART12	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	MAGI3	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART12	Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART12
Interactor2: MAGI3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg