Basic Information:

  VIRBase ID:  

VHID00346474

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART12:  MIMAT0003423          KCTD13:  NR_110933     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART12	KCTD13
miRBase Accession/Entrez ID	MIMAT0003423	253980
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BACURD1//FKSG86//hBACURD1//PDIP1//POLDIP1

RNA Editing:

Resource	Symbol	Editing Position
Lncediting	KCTD13	chr16: 29933183     chr16: 29933206     chr16: 29933184     chr16: 29933128     chr16: 29933180     chr16: 29933176     chr16: 29933170     chr16: 29933168     chr16: 29933134     chr16: 29933210     chr16: 29933111     chr16: 29933209     chr16: 29933108     chr16: 29933099

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KCTD13	chr16:29923930(-) A-I      intronic chr16:29927628(-) A-I      intronic chr16:29930841(-) A-I      intronic chr16:29930772(-) A-I      intronic chr16:29919812(-) A-I      intronic chr16:29918928(-) A-I      intronic chr16:29918914(-) A-I      intronic chr16:29927715(-) A-I      intronic chr16:29929508(-) A-I      intronic chr16:29918904(-) A-I      intronic chr16:29918903(-) A-I      intronic chr16:29929434(-) A-I      intronic chr16:29925981(-) A-I      intronic chr16:29929540(-) A-I      intronic chr16:29929490(-) A-I      intronic chr16:29935092(-) A-I      intronic chr16:29925991(-) A-I      intronic chr16:29925986(-) A-I      intronic chr16:29925871(-) A-I      intronic chr16:29923954(-) A-I      intronic chr16:29930817(-) A-I      intronic chr16:29930778(-) A-I      intronic chr16:29923943(-) A-I      intronic chr16:29923940(-) A-I      intronic chr16:29923939(-) A-I      intronic chr16:29921784(-) A-I      intronic chr16:29920193(-) A-I      intronic chr16:29936252(-) A-I      intronic chr16:29930776(-) A-I      intronic chr16:29933170(-) A-I      intronic chr16:29929479(-) A-I      intronic chr16:29929474(-) A-I      intronic chr16:29920281(-) A-I      intronic chr16:29930753(-) A-I      intronic chr16:29929038(-) A-I      intronic chr16:29927699(-) A-I      intronic chr16:29926026(-) A-I      intronic chr16:29928751(-) A-I      intronic chr16:29926010(-) A-I      intronic chr16:29926004(-) A-I      intronic chr16:29925289(-) A-I      intronic chr16:29927680(-) A-I      intronic chr16:29930722(-) A-I      intronic chr16:29929557(-) A-I      intronic chr16:29919813(-) A-I      intronic chr16:29927674(-) A-I      intronic chr16:29920194(-) A-I      intronic chr16:29920192(-) A-I      intronic chr16:29921146(-) A-I      intronic chr16:29925253(-) A-I      intronic chr16:29920181(-) A-I      intronic chr16:29920191(-) A-I      intronic chr16:29921787(-) A-I      intronic chr16:29929147(-) A-I      intronic chr16:29921607(-) A-I      intronic chr16:29921337(-) A-I      intronic chr16:29921344(-) A-I      intronic chr16:29921367(-) A-I      intronic chr16:29921380(-) A-I      intronic chr16:29921461(-) A-I      intronic chr16:29921464(-) A-I      intronic chr16:29921478(-) A-I      intronic chr16:29936333(-) A-I      intronic chr16:29936310(-) A-I      intronic chr16:29936218(-) A-I      intronic chr16:29936217(-) A-I      intronic chr16:29929137(-) A-I      intronic chr16:29921174(-) A-I      intronic chr16:29921010(-) A-I      intronic chr16:29928828(-) A-I      intronic chr16:29921491(-) A-I      intronic chr16:29921515(-) A-I      intronic chr16:29921516(-) A-I      intronic chr16:29921536(-) A-I      intronic chr16:29921539(-) A-I      intronic chr16:29921550(-) A-I      intronic chr16:29921556(-) A-I      intronic chr16:29918864(-) A-I      intronic chr16:29918878(-) A-I      intronic chr16:29918890(-) A-I      intronic chr16:29928909(-) A-I      intronic chr16:29936216(-) A-I      intronic chr16:29929000(-) A-I      intronic chr16:29920219(-) A-I      intronic chr16:29920212(-) A-I      intronic chr16:29920211(-) A-I      intronic chr16:29920204(-) A-I      intronic chr16:29920188(-) A-I      intronic chr16:29920178(-) A-I      intronic chr16:29920177(-) A-I      intronic chr16:29920144(-) A-I      intronic chr16:29920132(-) A-I      intronic chr16:29920126(-) A-I      intronic chr16:29920071(-) A-I      intronic chr16:29920062(-) A-I      intronic chr16:29920014(-) A-I      intronic chr16:29919984(-) A-I      intronic chr16:29919931(-) A-I      intronic chr16:29919913(-) A-I      intronic chr16:29919900(-) A-I      intronic chr16:29919884(-) A-I      intronic chr16:29925888(-) A-I      intronic chr16:29925898(-) A-I      intronic chr16:29919861(-) A-I      intronic chr16:29919860(-) A-I      intronic chr16:29919845(-) A-I      intronic chr16:29919794(-) A-I      intronic chr16:29919782(-) A-I      intronic chr16:29919241(-) A-I      intronic chr16:29919240(-) A-I      intronic chr16:29919216(-) A-I      intronic chr16:29919202(-) A-I      intronic chr16:29919093(-) A-I      intronic chr16:29925926(-) A-I      intronic chr16:29919065(-) A-I      intronic chr16:29919052(-) A-I      intronic chr16:29919046(-) A-I      intronic chr16:29919014(-) A-I      intronic chr16:29918987(-) A-I      intronic chr16:29918969(-) A-I      intronic chr16:29918965(-) A-I      intronic chr16:29918942(-) A-I      intronic chr16:29918905(-) A-I      intronic chr16:29929017(-) A-I      intronic chr16:29929018(-) A-I      intronic chr16:29929086(-) A-I      intronic chr16:29927939(-) A-I      intronic chr16:29927967(-) A-I      intronic chr16:29927968(-) A-I      intronic chr16:29936203(-) A-I      intronic chr16:29936177(-) A-I      intronic chr16:29936155(-) A-I      intronic chr16:29936075(-) A-I      intronic chr16:29935448(-) A-I      intronic chr16:29935432(-) A-I      intronic chr16:29935409(-) A-I      intronic chr16:29935360(-) A-I      intronic chr16:29935239(-) A-I      intronic chr16:29935174(-) A-I      intronic chr16:29935106(-) A-I      intronic chr16:29935093(-) A-I      intronic chr16:29935038(-) A-I      intronic chr16:29927993(-) A-I      intronic chr16:29935020(-) A-I      intronic chr16:29934980(-) A-I      intronic chr16:29934872(-) A-I      intronic chr16:29934856(-) A-I      intronic chr16:29925927(-) A-I      intronic chr16:29934852(-) A-I      intronic chr16:29925957(-) A-I      intronic chr16:29925970(-) A-I      intronic chr16:29934849(-) A-I      intronic chr16:29926027(-) A-I      intronic chr16:29926233(-) A-I      intronic chr16:29926241(-) A-I      intronic chr16:29926242(-) A-I      intronic chr16:29926245(-) A-I      intronic chr16:29926246(-) A-I      intronic chr16:29926291(-) A-I      intronic chr16:29926716(-) A-I      intronic chr16:29926728(-) A-I      intronic chr16:29926729(-) A-I      intronic chr16:29926768(-) A-I      intronic chr16:29926776(-) A-I      intronic chr16:29926807(-) A-I      intronic chr16:29926810(-) A-I      intronic chr16:29926873(-) A-I      intronic chr16:29926886(-) A-I      intronic chr16:29926891(-) A-I      intronic chr16:29934791(-) A-I      intronic chr16:29934777(-) A-I      intronic chr16:29933210(-) A-I      intronic chr16:29933209(-) A-I      intronic chr16:29933206(-) A-I      intronic chr16:29933184(-) A-I      intronic chr16:29933168(-) A-I      intronic chr16:29933128(-) A-I      intronic chr16:29933108(-) A-I      intronic chr16:29933099(-) A-I      intronic chr16:29930396(-) A-I      intronic chr16:29930382(-) A-I      intronic chr16:29928738(-) A-I      intronic chr16:29928763(-) A-I      intronic chr16:29930366(-) A-I      intronic chr16:29921571(-) A-I      intronic chr16:29921597(-) A-I      intronic chr16:29926916(-) A-I      intronic chr16:29927623(-) A-I      intronic chr16:29927642(-) A-I      intronic chr16:29927660(-) A-I      intronic chr16:29921907(-) A-I      intronic chr16:29927683(-) A-I      intronic chr16:29927922(-) A-I      intronic chr16:29921610(-) A-I      intronic chr16:29921632(-) A-I      intronic chr16:29921643(-) A-I      intronic chr16:29921778(-) A-I      intronic chr16:29921848(-) A-I      intronic chr16:29921849(-) A-I      intronic chr16:29921859(-) A-I      intronic chr16:29921917(-) A-I      intronic chr16:29921930(-) A-I      intronic chr16:29921952(-) A-I      intronic chr16:29921953(-) A-I      intronic chr16:29928764(-) A-I      intronic chr16:29928802(-) A-I      intronic chr16:29923800(-) A-I      intronic chr16:29923886(-) A-I      intronic chr16:29923890(-) A-I      intronic chr16:29923910(-) A-I      intronic chr16:29923926(-) A-I      intronic chr16:29923993(-) A-I      intronic chr16:29924050(-) A-I      intronic chr16:29924443(-) A-I      intronic chr16:29924517(-) A-I      intronic chr16:29925223(-) A-I      intronic chr16:29925320(-) A-I      intronic chr16:29925327(-) A-I      intronic chr16:29925328(-) A-I      intronic chr16:29925344(-) A-I      intronic chr16:29925787(-) A-I      intronic chr16:29925862(-) A-I      intronic chr16:29925865(-) A-I      intronic chr16:29925875(-) A-I      intronic chr16:29930365(-) A-I      intronic chr16:29930352(-) A-I      intronic chr16:29930288(-) A-I      intronic chr16:29930282(-) A-I      intronic chr16:29929930(-) A-I      intronic chr16:29929916(-) A-I      intronic chr16:29929206(-) A-I      intronic chr16:29929200(-) A-I      intronic chr16:29929186(-) A-I      intronic chr16:29929185(-) A-I      intronic chr16:29929183(-) A-I      intronic chr16:29929160(-) A-I      intronic chr16:29927661(-) A-I      intronic chr16:29933134(-) A-I      intronic chr16:29919977(-) A-I      intronic chr16:29921320(-) A-I      intronic chr16:29919820(-) A-I      intronic chr16:29928858(-) A-I      intronic chr16:29925936(-) A-I      intronic chr16:29929864(-) A-I      intronic chr16:29920286(-) A-I      intronic chr16:29920198(-) A-I      intronic chr16:29927964(-) A-I      intronic chr16:29927647(-) A-I      intronic chr16:29928724(-) A-I      intronic chr16:29934948(-) A-I      intronic chr16:29919224(-) A-I      intronic chr16:29929157(-) A-I      intronic chr16:29920066(-) A-I      intronic chr16:29934797(-) A-I      intronic chr16:29934926(-) A-I      intronic chr16:29919908(-) A-I      intronic chr16:29930116(-) A-I      intronic chr16:29928978(-) A-I      intronic chr16:29933176(-) A-I      intronic chr16:29919802(-) A-I      intronic chr16:29920273(-) A-I      intronic chr16:29921486(-) A-I      intronic chr16:29933183(-) A-I      intronic chr16:29928952(-) A-I      intronic chr16:29921944(-) A-I      intronic chr16:29918925(-) A-I      intronic chr16:29928765(-) A-I      intronic chr16:29933284(-) A-I      intronic chr16:29926890(-) A-I      intronic chr16:29921052(-) A-I      intronic chr16:29921039(-) A-I      intronic chr16:29935156(-) A-I      intronic chr16:29925329(-) A-I      intronic chr16:29918961(-) A-I      intronic chr16:29925923(-) A-I      intronic chr16:29925288(-) A-I      intronic chr16:29919062(-) A-I      intronic chr16:29921795(-) A-I      intronic chr16:29921619(-) A-I      intronic chr16:29928859(-) A-I      intronic chr16:29920248(-) A-I      intronic chr16:29920215(-) A-I      intronic chr16:29920260(-) A-I      intronic chr16:29935128(-) A-I      intronic chr16:29919883(-) A-I      intronic chr16:29925999(-) A-I      intronic chr16:29918930(-) A-I      intronic chr16:29930361(-) A-I      intronic chr16:29925967(-) A-I      intronic chr16:29933288(-) A-I      intronic chr16:29920293(-) A-I      intronic chr16:29926020(-) A-I      intronic chr16:29926743(-) A-I      intronic chr16:29919886(-) A-I      intronic chr16:29918911(-) A-I      intronic chr16:29929056(-) A-I      intronic chr16:29929037(-) A-I      intronic chr16:29921926(-) A-I      intronic chr16:29926271(-) A-I      intronic chr16:29919817(-) A-I      intronic chr16:29921969(-) A-I      intronic chr16:29929081(-) A-I      intronic chr16:29933253(-) A-I      intronic chr16:29920243(-) A-I      intronic chr16:29928776(-) A-I      intronic chr16:29919978(-) A-I      intronic chr16:29929230(-) A-I      intronic chr16:29934920(-) A-I      intronic chr16:29921476(-) A-I      intronic chr16:29929238(-) A-I      intronic chr16:29927682(-) A-I      intronic chr16:29933180(-) A-I      intronic chr16:29925227(-) A-I      intronic chr16:29920148(-) A-I      intronic chr16:29921672(-) A-I      intronic chr16:29920249(-) A-I      intronic chr16:29921783(-) A-I      intronic chr16:29930390(-) A-I      intronic chr16:29921477(-) A-I      intronic chr16:29926849(-) A-I      intronic chr16:29929212(-) A-I      intronic chr16:29926851(-) A-I      intronic chr16:29925972(-) A-I      intronic chr16:29933111(-) A-I      intronic chr16:29928775(-) A-I      intronic chr16:29928988(-) A-I      intronic chr16:29928843(-) A-I      intronic chr16:29926005(-) A-I      intronic chr16:29933282(-) A-I      intronic chr16:29919889(-) A-I      intronic chr16:29934986(-) A-I      intronic chr16:29928846(-) A-I      intronic chr16:29921931(-) A-I      intronic chr16:29921779(-) A-I      intronic chr16:29921800(-) A-I      intronic chr16:29919027(-) A-I      intronic chr16:29926000(-) A-I      intronic chr16:29921947(-) A-I      intronic chr16:29927609(-) A-I      intronic chr16:29925973(-) A-I      intronic chr16:29930767(-) A-I      intronic chr16:29921636(-) A-I      intronic chr16:29930821(-) A-I      intronic chr16:29921603(-) A-I      intronic chr16:29926861(-) A-I      intronic chr16:29930815(-) A-I      intronic chr16:29929894(-) A-I      intronic chr16:29930842(-) A-I      intronic chr16:29929956(-) A-I      intronic chr16:29926035(-) A-I      intronic chr16:29928799(-) A-I      intronic chr16:29920287(-) A-I      intronic chr16:29930754(-) A-I      intronic chr16:29925388(-) A-I      intronic chr16:29929426(-) A-I      intronic chr16:29929427(-) A-I      intronic chr16:29929492(-) A-I      intronic chr16:29930319(-) A-I      intronic chr16:29930063(-) A-I      intronic chr16:29928750(-) A-I      intronic chr16:29925870(-) A-I      intronic chr16:29928711(-) A-I      intronic chr16:29929495(-) A-I      intronic chr16:29930818(-) A-I      intronic chr16:29920405(-) A-I      intronic chr16:29930750(-) A-I      intronic chr16:29921392(-) A-I      intronic chr16:29929496(-) A-I      intronic chr16:29929428(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	KCTD13	chr16:29925288(-) A-I intron -    15342557 chr16:29925848(-) A-I intron -    15342557   //15258596 chr16:29925870(-) A-I intron -    15342557   //15258596   //22327324 chr16:29925923(-) A-I intron -    15342557   //15258596 chr16:29925936(-) A-I intron -    15258596 chr16:29925967(-) A-I intron -    15342557   //15258596 chr16:29925999(-) A-I intron -    15342557   //15258596 chr16:29926005(-) A-I intron -    15342557   //15258596 chr16:29926035(-) A-I intron -    15342557   //15258596 chr16:29930750(-) A-I intron -    15258596   //22327324 chr16:29930754(-) A-I intron -    15258596 chr16:29930767(-) A-I intron -    15258596   //22327324 chr16:29918911(-) A-I intron -    22327324 chr16:29920066(-) A-I intron -    22327324 chr16:29920148(-) A-I intron -    22327324 chr16:29920249(-) A-I intron -    22327324 chr16:29920273(-) A-I intron -    22327324 chr16:29920286(-) A-I intron -    22327324 chr16:29920293(-) A-I intron -    22327324 chr16:29921052(-) A-I intron -    22327324 chr16:29927647(-) A-I intron -    22327324 chr16:29929238(-) A-I intron -    22327324 chr16:29929496(-) A-I intron -    22327324 chr16:29929426(-) A-G intron -    22484847 chr16:29929427(-) A-G intron -    22484847 chr16:29929428(-) A-G intron -    22484847 chr16:29929492(-) A-G intron -    22484847 chr16:29929495(-) A-G intron -    22484847 chr16:29929496(-) A-G intron -    22484847 chr16:29930750(-) A-G intron -    22484847 chr16:29930754(-) A-G intron -    22484847 chr16:29930767(-) A-G intron -    22484847 chr16:29930815(-) A-G intron -    22484847 chr16:29930818(-) A-G intron -    22484847 chr16:29930821(-) A-G intron -    22484847 chr16:29930842(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KCTD13	chr16:29917758-29917759(-) m6A 3'UTR//intron       27773535 chr16:29918121-29918122(-) m6A 3'UTR//intron       24284625//24981863//27773535//27371828 chr16:29918155-29918156(-) m6A 3'UTR//intron       24284625//24981863//27773535//27371828 chr16:29918196-29918197(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//27371828 chr16:29918283-29918284(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828 chr16:29918355-29918356(-) m6A 3'UTR//CDS//exon//intron       27371828 chr16:29918371-29918372(-) m6A 3'UTR//CDS//exon//intron       27371828 chr16:29918388-29918389(-) m6A 3'UTR//CDS//exon//intron       - chr16:29918395-29918396(-) m6A 3'UTR//CDS//exon//intron       - chr16:29923476-29923477(-) m6A exon//intron       27371828 chr16:29923547-29923548(-) m6A exon//intron       24284625//27371828//27773536 chr16:29923652-29923653(-) m6A exon//intron       22608085 chr16:29926479-29926480(-) m6A intron       - chr16:29926494-29926495(-) m6A intron       - chr16:29926524-29926525(-) m6A intron       - chr16:29926547-29926548(-) m6A intron       - chr16:29926566-29926567(-) m6A intron       - chr16:29926576-29926577(-) m6A intron       - chr16:29926591-29926592(-) m6A intron       - chr16:29930890-29930891(-) m6A CDS//intron       24981863 chr16:29934314-29934315(-) m6A CDS//intron       - chr16:29934529-29934530(-) m6A CDS//exon       - chr16:29934585-29934586(-) m6A CDS//exon       - chr16:29937238-29937239(-) m6A CDS//exon       27773536 chr16:29937687-29937688(-) m6A 5'UTR       24284625 chr16:29937750-29937751(-) m6A 5'UTR       24284625 chr16:29937769-29937770(-) m6A 5'UTR       24284625//25456834//24981863 chr16:29937819-29937820(-) m6A 5'UTR       24284625//25456834//24981863 chr16:29937835-29937836(-) m6A 5'UTR       24284625//25456834//24981863 chr16:29938199-29938200(-) m6A 5'UTR       24284625//25456834//24981863 chr16:29938253-29938254(-) m6A 5'UTR       24284625//25456834//24981863 chr16:29938312-29938313(-) m6A 5'UTR       24284625//25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART12	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	KCTD13	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART12	Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART12
Interactor2: KCTD13

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg