Basic Information:

  VIRBase ID:  

VHID00343345

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART12:  MIMAT0003423          TOX4:  NM_001303523     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART12	TOX4
miRBase Accession/Entrez ID	MIMAT0003423	9878
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C14orf92//KIAA0737//LCP1//MIG7

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TOX4	chr14:21949129(+) A-I      intronic chr14:21949155(+) A-I      intronic chr14:21949128(+) A-I      intronic chr14:21962038(+) A-I      intronic chr14:21948227(+) A-I      intronic chr14:21949521(+) A-I      intronic chr14:21954114(+) A-I      intronic chr14:21959707(+) A-I      intronic chr14:21952230(+) A-I      intronic chr14:21949590(+) A-I      intronic chr14:21949003(+) A-I      intronic chr14:21952207(+) A-I      intronic chr14:21954325(+) A-I      intronic chr14:21958159(+) A-I      intronic chr14:21953172(+) A-I      intronic chr14:21957855(+) A-I      intronic chr14:21958409(+) A-I      intronic chr14:21952128(+) A-I      intronic chr14:21958514(+) A-I      intronic chr14:21958540(+) A-I      intronic chr14:21952088(+) A-I      intronic chr14:21958589(+) A-I      intronic chr14:21958594(+) A-I      intronic chr14:21959010(+) A-I      intronic chr14:21959054(+) A-I      intronic chr14:21949558(+) A-I      intronic chr14:21949073(+) A-I      intronic chr14:21959110(+) A-I      intronic chr14:21947782(+) A-I      intronic chr14:21953410(+) A-I      intronic chr14:21958543(+) A-I      intronic chr14:21953355(+) A-I      intronic chr14:21953178(+) A-I      intronic chr14:21949161(+) A-I      intronic chr14:21959158(+) A-I      intronic chr14:21953040(+) A-I      intronic chr14:21949572(+) A-I      intronic chr14:21947612(+) A-I      intronic chr14:21947645(+) A-I      intronic chr14:21959612(+) A-I      intronic chr14:21947687(+) A-I      intronic chr14:21949184(+) A-I      intronic chr14:21948189(+) A-I      intronic chr14:21948212(+) A-I      intronic chr14:21953002(+) A-I      intronic chr14:21947062(+) A-I      intronic chr14:21958422(+) A-I      intronic chr14:21947063(+) A-I      intronic chr14:21959173(+) A-I      intronic chr14:21959542(+) A-I      intronic chr14:21959582(+) A-I      intronic chr14:21947244(+) A-I      intronic chr14:21952228(+) A-I      intronic chr14:21959599(+) A-I      intronic chr14:21959623(+) A-I      intronic chr14:21947404(+) A-I      intronic chr14:21959657(+) A-I      intronic chr14:21947405(+) A-I      intronic chr14:21959721(+) A-I      intronic chr14:21959724(+) A-I      intronic chr14:21960059(+) A-I      intronic chr14:21949591(+) A-I      intronic chr14:21960063(+) A-I      intronic chr14:21960112(+) A-I      intronic chr14:21949240(+) A-I      intronic chr14:21949239(+) A-I      intronic chr14:21951990(+) A-I      intronic chr14:21949236(+) A-I      intronic chr14:21953413(+) A-I      intronic chr14:21952084(+) A-I      intronic chr14:21958566(+) A-I      intronic chr14:21952141(+) A-I      intronic chr14:21960120(+) A-I      intronic chr14:21960125(+) A-I      intronic chr14:21962003(+) A-I      intronic chr14:21962009(+) A-I      intronic chr14:21958472(+) A-I      intronic chr14:21962536(+) A-I      intronic chr14:21962794(+) A-I      intronic chr14:21953373(+) A-I      intronic chr14:21953454(+) A-I      intronic chr14:21953489(+) A-I      intronic chr14:21948226(+) A-I      intronic chr14:21965715(+) A-I      3'UTR chr14:21965856(+) A-I      3'UTR chr14:21965932(+) A-I      3'UTR chr14:21962099(+) A-I      intronic chr14:21952066(+) A-I      intronic chr14:21947024(+) A-I      intronic chr14:21960152(+) A-I      intronic chr14:21948220(+) A-I      intronic chr14:21949548(+) A-I      intronic chr14:21958086(+) A-I      intronic chr14:21953065(+) A-I      intronic chr14:21954312(+) A-I      intronic chr14:21947555(+) A-I      intronic chr14:21952607(+) A-I      intronic chr14:21959577(+) A-I      intronic chr14:21958489(+) A-I      intronic chr14:21953328(+) A-I      intronic chr14:21949115(+) A-I      intronic chr14:21957761(+) A-I      intronic chr14:21959683(+) A-I      intronic chr14:21947445(+) A-I      intronic chr14:21952233(+) A-I      intronic chr14:21958523(+) A-I      intronic chr14:21958473(+) A-I      intronic chr14:21957902(+) A-I      intronic chr14:21949096(+) A-I      intronic chr14:21962048(+) A-I      intronic chr14:21952211(+) A-I      intronic chr14:21948995(+) A-I      intronic chr14:21958186(+) A-I      intronic chr14:21962147(+) A-I      intronic chr14:21952203(+) A-I      intronic chr14:21947739(+) A-I      intronic chr14:21958617(+) A-I      intronic chr14:21953904(+) A-I      intronic chr14:21954210(+) A-I      intronic chr14:21949490(+) A-I      intronic chr14:21947560(+) A-I      intronic chr14:21954112(+) A-I      intronic chr14:21959916(+) A-I      intronic chr14:21949361(+) A-I      intronic chr14:21958474(+) A-I      intronic chr14:21953171(+) A-I      intronic chr14:21961860(+) A-I      intronic chr14:21949547(+) A-I      intronic chr14:21954131(+) A-I      intronic chr14:21947238(+) A-I      intronic chr14:21958458(+) A-I      intronic chr14:21947385(+) A-I      intronic chr14:21953374(+) A-I      intronic chr14:21949102(+) A-I      intronic chr14:21951769(+) A-I      intronic chr14:21958382(+) A-I      intronic chr14:21948260(+) A-I      intronic chr14:21959648(+) A-I      intronic chr14:21958527(+) A-I      intronic chr14:21949573(+) A-I      intronic chr14:21959659(+) A-I      intronic chr14:21954200(+) A-I      intronic chr14:21948257(+) A-I      intronic chr14:21952951(+) A-I      intronic chr14:21957867(+) A-I      intronic chr14:21952608(+) A-I      intronic chr14:21953655(+) A-I      intronic chr14:21949477(+) A-I      intronic chr14:21957777(+) A-I      intronic chr14:21949523(+) A-I      intronic chr14:21949418(+) A-I      intronic chr14:21952150(+) A-I      intronic chr14:21952229(+) A-I      intronic chr14:21949377(+) A-I      intronic chr14:21947728(+) A-I      intronic chr14:21949467(+) A-I      intronic chr14:21947631(+) A-I      intronic chr14:21966088(+) A-I      3'UTR chr14:21966024(+) A-I      3'UTR chr14:21965858(+) A-I      3'UTR chr14:21965805(+) A-I      3'UTR chr14:21966101(+) A-I      3'UTR chr14:21966041(+) A-I      3'UTR chr14:21965933(+) A-I      3'UTR chr14:21965751(+) A-I      3'UTR chr14:21966382(+) A-I      3'UTR chr14:21966074(+) A-I      3'UTR chr14:21965772(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TOX4	chr14:21966024(+) A-I exon 3'UTR    15545495 chr14:21966074(+) A-I exon 3'UTR    15545495 chr14:21966101(+) A-I exon 3'UTR    15545495 chr14:21966382(+) A-I exon 3'UTR    15545495 chr14:21947238(+) A-G intron -    22484847 chr14:21947385(+) A-G intron -    22484847 chr14:21947387(+) C-T intron -    22484847 chr14:21965805(+) A-G intron -    22484847 chr14:21965858(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TOX4	chr14:21945344-21945345(+) m6A 5'UTR//exon//intron       25456834//24981863 chr14:21945449-21945450(+) m6A exon//intron       24284625//25456834//24981863 chr14:21957417-21957418(+) m6A 3'UTR//CDS//exon       - chr14:21957426-21957427(+) m6A 3'UTR//CDS//exon       - chr14:21960518-21960519(+) m6A 3'UTR//CDS//exon       - chr14:21960678-21960679(+) m6A 3'UTR//CDS//exon       - chr14:21960711-21960712(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr14:21960832-21960833(+) m6A 3'UTR//CDS//exon       - chr14:21960890-21960891(+) m6A 3'UTR//CDS//exon       - chr14:21960987-21960988(+) m6A 3'UTR//CDS//exon       24284625 chr14:21961287-21961288(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr14:21965061-21965062(+) m6A 3'UTR       24981863//27773535 chr14:21965085-21965086(+) m6A 3'UTR       24981863//27773535 chr14:21966272-21966273(+) m6A 3'UTR       27773535 chr14:21966451-21966452(+) m6A 3'UTR       27773535 chr14:21966518-21966519(+) m6A 3'UTR       27773535 chr14:21966539-21966540(+) m6A 3'UTR       27773535 chr14:21967279-21967280(+) m6A 3'UTR       27773535 chr14:21967294-21967295(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART12	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TOX4	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART12	Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART12
Interactor2: TOX4

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg