Basic Information:

  VIRBase ID:  

VHID00341301

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          SMIM15:  NM_001048249     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	SMIM15
miRBase Accession/Entrez ID	MIMAT0003422	643155
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C5orf43

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SMIM15	chr5:60454459-60454460(-) m6A 3'UTR       27773535 chr5:60454464-60454465(-) m6A 3'UTR       27773535 chr5:60454606-60454607(-) m6A 3'UTR       27773535 chr5:60454627-60454628(-) m6A 3'UTR       27773535 chr5:60454739-60454740(-) m6A 3'UTR       24981863 chr5:60455259-60455260(-) m6A 3'UTR       27773535 chr5:60455367-60455368(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:60455397-60455398(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:60455426-60455427(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:60455441-60455442(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:60455475-60455476(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:60455764-60455765(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr5:60455769-60455770(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr5:60455807-60455808(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr5:60455945-60455946(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr5:60456009-60456010(-) m6A 5'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr5:60456945-60456946(-) m6A 5'UTR       24284625//24209618//24981863//28052920//27773535//22608085 chr5:60456998-60456999(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr5:60457008-60457009(-) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr5:60457034-60457035(-) m6A 5'UTR       24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SMIM15	Exosome Blood     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: SMIM15

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep
Support Database	RepTar//VmiReg