Detail Information

Basic Information:


  VIRBase ID:  

VHID00341040

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:           TRPV3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART11-3p TRPV3
miRBase
Accession/Entrez ID		 MIMAT0003422 162514
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - FNEPPK2//OLMS//OLMS1//VRL3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TRPV3
chr17:3442859(-) A-I      intronic
chr17:3442729(-) A-I      intronic
chr17:3442851(-) A-I      intronic
chr17:3441344(-) A-I      intronic
chr17:3442087(-) A-I      intronic
chr17:3442125(-) A-I      intronic
chr17:3442669(-) A-I      intronic
chr17:3453999(-) A-I      intronic
chr17:3429725(-) A-I      intronic
chr17:3440729(-) A-I      intronic
chr17:3455715(-) A-I      intronic
chr17:3429160(-) A-I      intronic
chr17:3420785(-) A-I      intronic
chr17:3440731(-) A-I      intronic
chr17:3443282(-) A-I      intronic
chr17:3449588(-) A-I      intronic
chr17:3442724(-) A-I      intronic
chr17:3420667(-) A-I      intronic
chr17:3450140(-) A-I      intronic
chr17:3428001(-) A-I      intronic
chr17:3421250(-) A-I      intronic
chr17:3428031(-) A-I      intronic
chr17:3429010(-) A-I      intronic
chr17:3420058(-) A-I      intronic
chr17:3440728(-) A-I      intronic
chr17:3443287(-) A-I      intronic
chr17:3439799(-) A-I      intronic
chr17:3429051(-) A-I      intronic
chr17:3429554(-) A-I      intronic
chr17:3421386(-) A-I      intronic
chr17:3442774(-) A-I      intronic
chr17:3421257(-) A-I      intronic
chr17:3442174(-) A-I      intronic
chr17:3449568(-) A-I      intronic
chr17:3429672(-) A-I      intronic
chr17:3455560(-) A-I      intronic
chr17:3419277(-) A-I      intronic
chr17:3420756(-) A-I      intronic
chr17:3436898(-) A-I      intronic
chr17:3440535(-) A-I      intronic
chr17:3429052(-) A-I      intronic
chr17:3442728(-) A-I      intronic
chr17:3437600(-) A-I      intronic
chr17:3429141(-) A-I      intronic
chr17:3442725(-) A-I      intronic
chr17:3444415(-) A-I      intronic
chr17:3449551(-) A-I      intronic
chr17:3420801(-) A-I      intronic
chr17:3437694(-) A-I      intronic
chr17:3429537(-) A-I      intronic
chr17:3442941(-) A-I      intronic
chr17:3436824(-) A-I      intronic
chr17:3436860(-) A-I      intronic
chr17:3428009(-) A-I      intronic
chr17:3419288(-) A-I      intronic
chr17:3436805(-) A-I      intronic
chr17:3421362(-) A-I      intronic
chr17:3429095(-) A-I      intronic
chr17:3421385(-) A-I      intronic
chr17:3444494(-) A-I      intronic
chr17:3455652(-) A-I      intronic
chr17:3420694(-) A-I      intronic
chr17:3441990(-) A-I      intronic
chr17:3441466(-) A-I      intronic
chr17:3437625(-) A-I      intronic
chr17:3455661(-) A-I      intronic
chr17:3441912(-) A-I      intronic
chr17:3429159(-) A-I      intronic
chr17:3428093(-) A-I      intronic
chr17:3443418(-) A-I      intronic
chr17:3442797(-) A-I      intronic
chr17:3428022(-) A-I      intronic
chr17:3440832(-) A-I      intronic
chr17:3442043(-) A-I      intronic
chr17:3436858(-) A-I      intronic
chr17:3428938(-) A-I      intronic
chr17:3445295(-) A-I      intronic
chr17:3443489(-) A-I      intronic
chr17:3429609(-) A-I      intronic
chr17:3418873(-) A-I      intronic
chr17:3420677(-) A-I      intronic
chr17:3455580(-) A-I      intronic
chr17:3429098(-) A-I      intronic
chr17:3420730(-) A-I      intronic
chr17:3455451(-) A-I      intronic
chr17:3443515(-) A-I      intronic
chr17:3443488(-) A-I      intronic
chr17:3429660(-) A-I      intronic
chr17:3442860(-) A-I      intronic
chr17:3428979(-) A-I      intronic
chr17:3429650(-) A-I      intronic
chr17:3429084(-) A-I      intronic
chr17:3429111(-) A-I      intronic
chr17:3442016(-) A-I      intronic
chr17:3443487(-) A-I      intronic
chr17:3421339(-) A-I      intronic
chr17:3442061(-) A-I      intronic
chr17:3455556(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TRPV3
chr17:3419218(-) A-I intron -    15342557   //15258596
chr17:3419277(-) A-I intron -    15342557   //15258596
chr17:3419288(-) A-I intron -    15342557   //15258596
chr17:3420667(-) A-I intron -    15342557   //15258596
chr17:3420677(-) A-I intron -    15342557   //15258596
chr17:3420730(-) A-I intron -    15342557   //15258596
chr17:3420756(-) A-I intron -    15342557   //15258596
chr17:3420785(-) A-I intron -    15342557   //15258596
chr17:3420801(-) A-I intron -    15258596
chr17:3421250(-) A-I intron -    15342557   //15258596
chr17:3421257(-) A-I intron -    15342557   //15258596
chr17:3421339(-) A-I intron -    15342557   //15258596
chr17:3421362(-) A-I intron -    15342557   //15258596
chr17:3421385(-) A-I intron -    15342557   //15258596
chr17:3421386(-) A-I intron -    15342557   //15258596
chr17:3455556(-) A-I intron -    15342557
chr17:3455560(-) A-I intron -    15342557
chr17:3455580(-) A-I intron -    15342557
chr17:3455628(-) A-I intron -    15342557
chr17:3455652(-) A-I intron -    15342557
chr17:3455661(-) A-I intron -    15342557
chr17:3455715(-) A-I intron -    15342557
chr17:3456735(-) A-I intron -    15342557
chr17:3457878(-) A-I intron -    15342557
chr17:3458072(-) A-I exon CDS    15342557
chr17:3428022(-) A-G intron -    22484847
chr17:3429554(-) A-G intron -    22484847
chr17:3442941(-) A-G intron -    22484847
chr17:3443418(-) A-G intron -    22484847
chr17:3443487(-) A-G intron -    22484847
chr17:3443488(-) A-G intron -    22484847
chr17:3443489(-) A-G intron -    22484847
chr17:3443515(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TRPV3
chr17:3415498-3415499(-) m6A 3'UTR       27773535
chr17:3415757-3415758(-) m6A 3'UTR       27773535
chr17:3415927-3415928(-) m6A 3'UTR       27773535
chr17:3416048-3416049(-) m6A 3'UTR       27773535
chr17:3416199-3416200(-) m6A 3'UTR       27773535
chr17:3416354-3416355(-) m6A 3'UTR       27773535
chr17:3416394-3416395(-) m6A 3'UTR       27773535
chr17:3416460-3416461(-) m6A 3'UTR       27773535
chr17:3416517-3416518(-) m6A 3'UTR       27773535
chr17:3416587-3416588(-) m6A 3'UTR       27773535
chr17:3416629-3416630(-) m6A 3'UTR       27773535
chr17:3416648-3416649(-) m6A 3'UTR       27773535
chr17:3416661-3416662(-) m6A 3'UTR       27773535
chr17:3416980-3416981(-) m6A 3'UTR       27773535
chr17:3416993-3416994(-) m6A 3'UTR       27773535
chr17:3417019-3417020(-) m6A 3'UTR       27773535
chr17:3417054-3417055(-) m6A 3'UTR       27773535
chr17:3433363-3433364(-) m6A 3'UTR//CDS//exon       27773535
chr17:3433375-3433376(-) m6A 3'UTR//CDS//exon       27773535
chr17:3433413-3433414(-) m6A 3'UTR//CDS//exon       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TRPV3
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART11-3p
Nvp-aew541       11476171

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART11-3p
Interactor2: TRPV3

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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