Basic Information:

  VIRBase ID:  

VHID00340855

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          NACC1:  NM_052876     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	NACC1
miRBase Accession/Entrez ID	MIMAT0003422	112939
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BEND8//BTBD14B//BTBD30//NAC-1//NAC1//NECFM

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NACC1	chr19:13239366(+) A-I      intronic chr19:13244113(+) A-I      intronic chr19:13237003(+) A-I      intronic chr19:13234963(+) A-I      intronic chr19:13235018(+) A-I      intronic chr19:13235053(+) A-I      intronic chr19:13235116(+) A-I      intronic chr19:13236753(+) A-I      intronic chr19:13236901(+) A-I      intronic chr19:13236952(+) A-I      intronic chr19:13236957(+) A-I      intronic chr19:13236962(+) A-I      intronic chr19:13236765(+) A-I      intronic chr19:13241074(+) A-I      intronic chr19:13240914(+) A-I      intronic chr19:13237139(+) A-I      intronic chr19:13237125(+) A-I      intronic chr19:13243211(+) A-I      intronic chr19:13243015(+) A-I      intronic chr19:13236987(+) A-I      intronic chr19:13234935(+) A-I      intronic chr19:13240910(+) A-I      intronic chr19:13238437(+) A-I      intronic chr19:13238394(+) A-I      intronic chr19:13243180(+) A-I      intronic chr19:13243028(+) A-I      intronic chr19:13238378(+) A-I      intronic chr19:13242904(+) A-I      intronic chr19:13242866(+) A-I      intronic chr19:13237799(+) A-I      intronic chr19:13242779(+) A-I      intronic chr19:13242774(+) A-I      intronic chr19:13242744(+) A-I      intronic chr19:13236999(+) A-I      intronic chr19:13236994(+) A-I      intronic chr19:13242738(+) A-I      intronic chr19:13241584(+) A-I      intronic chr19:13241579(+) A-I      intronic chr19:13241560(+) A-I      intronic chr19:13241547(+) A-I      intronic chr19:13241419(+) A-I      intronic chr19:13240927(+) A-I      intronic chr19:13243071(+) A-I      intronic chr19:13235924(+) A-I      intronic chr19:13235094(+) A-I      intronic chr19:13242735(+) A-I      intronic chr19:13243210(+) A-I      intronic chr19:13237056(+) A-I      intronic chr19:13242860(+) A-I      intronic chr19:13235246(+) A-I      intronic chr19:13243029(+) A-I      intronic chr19:13243080(+) A-I      intronic chr19:13242840(+) A-I      intronic chr19:13243020(+) A-I      intronic chr19:13240908(+) A-I      intronic chr19:13236602(+) A-I      intronic chr19:13235107(+) A-I      intronic chr19:13235828(+) A-I      intronic chr19:13240695(+) A-I      intronic chr19:13242841(+) A-I      intronic chr19:13242705(+) A-I      intronic chr19:13242730(+) A-I      intronic chr19:13236825(+) A-I      intronic chr19:13234957(+) A-I      intronic chr19:13243083(+) A-I      intronic chr19:13236958(+) A-I      intronic chr19:13242753(+) A-I      intronic chr19:13238602(+) A-I      intronic chr19:13235651(+) A-I      intronic chr19:13243143(+) A-I      intronic chr19:13236898(+) A-I      intronic chr19:13235028(+) A-I      intronic chr19:13238558(+) A-I      intronic chr19:13236908(+) A-I      intronic chr19:13242909(+) A-I      intronic chr19:13237064(+) A-I      intronic chr19:13237868(+) A-I      intronic chr19:13235711(+) A-I      intronic chr19:13235067(+) A-I      intronic chr19:13235093(+) A-I      intronic chr19:13235707(+) A-I      intronic chr19:13237816(+) A-I      intronic chr19:13236997(+) A-I      intronic chr19:13237042(+) A-I      intronic chr19:13235049(+) A-I      intronic chr19:13235868(+) A-I      intronic chr19:13238349(+) A-I      intronic chr19:13236690(+) A-I      intronic chr19:13235061(+) A-I      intronic chr19:13243109(+) A-I      intronic chr19:13235890(+) A-I      intronic chr19:13237815(+) A-I      intronic chr19:13235037(+) A-I      intronic chr19:13235307(+) A-I      intronic chr19:13242754(+) A-I      intronic chr19:13235844(+) A-I      intronic chr19:13242975(+) A-I      intronic chr19:13243205(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NACC1	chr19:13241739(+) A-I intron -    15342557 chr19:13242705(+) A-I intron -    15342557 chr19:13242859(+) A-I intron -    15342557 chr19:13242860(+) A-I intron -    15342557 chr19:13243020(+) A-I intron -    15342557 chr19:13243029(+) A-I intron -    15342557 chr19:13243205(+) A-I intron -    15342557 chr19:13243210(+) A-I intron -    15342557 chr19:13243083(+) A-I intron -    22327324 chr19:13236602(+) A-G intron -    22484847 chr19:13237127(+) A-G intron -    22484847 chr19:13242705(+) A-G intron -    22484847 chr19:13243020(+) A-G intron -    22484847 chr19:13243083(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NACC1	chr19:13229241-13229242(+) m6A 5'UTR//intron       24284625//24209618//25456834//22575960//22608085 chr19:13246030-13246031(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:13246052-13246053(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:13246086-13246087(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:13246190-13246191(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:13246351-13246352(+) Gm CDS       - chr19:13246468-13246469(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:13246541-13246542(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:13246580-13246581(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:13246649-13246650(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:13246804-13246805(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:13246963-13246964(+) m6A CDS       24284625//24209618//24981863//22575960 chr19:13247114-13247115(+) m6A CDS       24284625 chr19:13247136-13247137(+) m6A CDS       24284625 chr19:13247156-13247157(+) m6A CDS       24284625 chr19:13248120-13248121(+) m6A CDS       24284625 chr19:13248293-13248294(+) m6A CDS//intron       24284625//22575960 chr19:13248362-13248363(+) m6A CDS//intron       24284625//22575960 chr19:13248972-13248973(+) m6A CDS       24284625//22575960 chr19:13249140-13249141(+) m6A CDS       24284625//25456834//24981863//26404942//22575960 chr19:13249169-13249170(+) m6A CDS       24284625//25456834//24981863//26404942//22575960 chr19:13249212-13249213(+) Y CDS       26075521 chr19:13249315-13249316(+) m6A 3'UTR       24284625//24981863//22575960 chr19:13249399-13249400(+) m6A 3'UTR       24284625//24981863//22575960 chr19:13249621-13249622(+) m6A 3'UTR       24284625//22575960 chr19:13249650-13249651(+) m6A 3'UTR       24284625//22575960 chr19:13249753-13249754(+) m6A 3'UTR       24284625 chr19:13249777-13249778(+) m6A 3'UTR       24284625 chr19:13249927-13249928(+) m6A 3'UTR       22575960 chr19:13250836-13250837(+) m6A 3'UTR       24284625 chr19:13250858-13250859(+) m6A 3'UTR       24284625 chr19:13250875-13250876(+) m6A 3'UTR       24284625 chr19:13250994-13250995(+) m6A 3'UTR       24284625 chr19:13251175-13251176(+) m6A 3'UTR       24284625 chr19:13251192-13251193(+) m6A 3'UTR       24284625 chr19:13251485-13251486(+) m6A 3'UTR       24284625//25456834//24981863 chr19:13251508-13251509(+) m6A 3'UTR       24284625//25456834//24981863 chr19:13251700-13251701(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr19:13251770-13251771(+) m6A 3'UTR       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NACC1	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: NACC1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg