Basic Information:

  VIRBase ID:  

VHID00340372

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          HIF1AN:  NM_017902     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	HIF1AN
miRBase Accession/Entrez ID	MIMAT0003422	55662
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FIH1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HIF1AN	chr10:102300880(+) A-I      intronic chr10:102301281(+) A-I      intronic chr10:102302188(+) A-I      intronic chr10:102303522(+) A-I      intronic chr10:102303540(+) A-I      intronic chr10:102303046(+) A-I      intronic chr10:102300765(+) A-I      intronic chr10:102302319(+) A-I      intronic chr10:102298780(+) A-I      intronic chr10:102303047(+) A-I      intronic chr10:102298314(+) A-I      intronic chr10:102303048(+) A-I      intronic chr10:102303375(+) A-I      intronic chr10:102298686(+) A-I      intronic chr10:102298732(+) A-I      intronic chr10:102298762(+) A-I      intronic chr10:102298763(+) A-I      intronic chr10:102300716(+) A-I      intronic chr10:102303386(+) A-I      intronic chr10:102300717(+) A-I      intronic chr10:102300789(+) A-I      intronic chr10:102300794(+) A-I      intronic chr10:102298319(+) A-I      intronic chr10:102304079(+) A-I      intronic chr10:102300739(+) A-I      intronic chr10:102300901(+) A-I      intronic chr10:102303536(+) A-I      intronic chr10:102302374(+) A-I      intronic chr10:102301014(+) A-I      intronic chr10:102298467(+) A-I      intronic chr10:102300109(+) A-I      intronic chr10:102301076(+) A-I      intronic chr10:102301279(+) A-I      intronic chr10:102300046(+) A-I      intronic chr10:102304078(+) A-I      intronic chr10:102301027(+) A-I      intronic chr10:102301375(+) A-I      intronic chr10:102301097(+) A-I      intronic chr10:102300086(+) A-I      intronic chr10:102298789(+) A-I      intronic chr10:102302323(+) A-I      intronic chr10:102302373(+) A-I      intronic chr10:102301087(+) A-I      intronic chr10:102301414(+) A-I      intronic chr10:102298457(+) A-I      intronic chr10:102298792(+) A-I      intronic chr10:102298489(+) A-I      intronic chr10:102298498(+) A-I      intronic chr10:102303232(+) A-I      intronic chr10:102301338(+) A-I      intronic chr10:102298963(+) A-I      intronic chr10:102301289(+) A-I      intronic chr10:102301005(+) A-I      intronic chr10:102298326(+) A-I      intronic chr10:102298358(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HIF1AN	chr10:102300086(+) A-G intron -    22484847 chr10:102300109(+) A-G intron -    22484847 chr10:102301014(+) A-G intron -    22484847 chr10:102301375(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HIF1AN	chr10:102295975-102295976(+) m6A exon//intron       - chr10:102296382-102296383(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr10:102300443-102300444(+) m6A 3'UTR//CDS//exon       24981863 chr10:102306963-102306964(+) m6A CDS       24209618//26404942 chr10:102306996-102306997(+) m6A CDS       24209618//26404942 chr10:102307865-102307866(+) m6A CDS       24284625//24209618//26404942//22608085 chr10:102307960-102307961(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr10:102307967-102307968(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr10:102308003-102308004(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr10:102308008-102308009(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085 chr10:102308082-102308083(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr10:102308470-102308471(+) m6A 3'UTR       24981863//27773535//22575960 chr10:102308588-102308589(+) m6A 3'UTR       24981863//22608085 chr10:102308596-102308597(+) m6A 3'UTR       24981863//22608085 chr10:102308604-102308605(+) m6A 3'UTR       24981863//22608085 chr10:102308636-102308637(+) m6A 3'UTR       24981863 chr10:102309108-102309109(+) Y 3'UTR       26075521 chr10:102310341-102310342(+) m6A 3'UTR       - chr10:102310419-102310420(+) m6A 3'UTR       - chr10:102311610-102311611(+) m6A 3'UTR       - chr10:102311622-102311623(+) m6A 3'UTR       - chr10:102311641-102311642(+) m6A 3'UTR       - chr10:102312331-102312332(+) Y 3'UTR       26075521 chr10:102316120-102316121(+) m6A 3'UTR       24981863 chr10:102316185-102316186(+) m6A 3'UTR       24981863 chr10:102316308-102316309(+) m6A 3'UTR       24981863 chr10:102316840-102316841(+) m6A 3'UTR       24981863 chr10:102316874-102316875(+) m6A 3'UTR       24981863 chr10:102316880-102316881(+) m6A 3'UTR       24981863 chr10:102316886-102316887(+) m6A 3'UTR       24981863 chr10:102316957-102316958(+) m6A 3'UTR       24981863 chr10:102316981-102316982(+) m6A 3'UTR       24981863 chr10:102317002-102317003(+) m6A 3'UTR       24981863 chr10:102317819-102317820(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HIF1AN	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: HIF1AN

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg