Basic Information:

  VIRBase ID:  

VHID00340340

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          ARHGEF10L:  NR_137287     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	ARHGEF10L
miRBase Accession/Entrez ID	MIMAT0003422	55160
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GrinchGEF

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARHGEF10L	chr1:17880093(+) A-I      intronic chr1:17879011(+) A-I      intronic chr1:17868639(+) A-I      intronic chr1:17903640(+) A-I      intronic chr1:17933895(+) A-I      intronic chr1:17933769(+) A-I      intronic chr1:17987702(+) A-I      intronic chr1:17933890(+) A-I      intronic chr1:17927424(+) A-I      intronic chr1:17878994(+) A-I      intronic chr1:17921165(+) A-I      intronic chr1:17921163(+) A-I      intronic chr1:17880163(+) A-I      intronic chr1:17910563(+) A-I      intronic chr1:17878998(+) A-I      intronic chr1:17907645(+) A-I      intronic chr1:17881155(+) A-I      intronic chr1:17881160(+) A-I      intronic chr1:17933788(+) A-I      intronic chr1:17933867(+) A-I      intronic chr1:17907692(+) A-I      intronic chr1:17881197(+) A-I      intronic chr1:17881914(+) A-I      intronic chr1:17881968(+) A-I      intronic chr1:17883759(+) A-I      intronic chr1:17933849(+) A-I      intronic chr1:17904918(+) A-I      intronic chr1:17907639(+) A-I      intronic chr1:17933774(+) A-I      intronic chr1:17878974(+) A-I      intronic chr1:17888678(+) A-I      intronic chr1:17881348(+) A-I      intronic chr1:17870842(+) A-I      intronic chr1:17878921(+) A-I      intronic chr1:17921078(+) A-I      intronic chr1:17964273(+) A-I      intronic chr1:17894043(+) A-I      intronic chr1:17881250(+) A-I      intronic chr1:17924799(+) A-I      intronic chr1:17876918(+) A-I      intronic chr1:17883734(+) A-I      intronic chr1:17925597(+) A-I      intronic chr1:17888655(+) A-I      intronic chr1:17909444(+) A-I      intronic chr1:17880204(+) A-I      intronic chr1:17888648(+) A-I      intronic chr1:17925750(+) A-I      intronic chr1:17948005(+) A-I      intronic chr1:17879141(+) A-I      intronic chr1:17905001(+) A-I      intronic chr1:17905022(+) A-I      intronic chr1:17880021(+) A-I      intronic chr1:17889968(+) A-I      intronic chr1:17876888(+) A-I      intronic chr1:17905018(+) A-I      intronic chr1:17870863(+) A-I      intronic chr1:17962282(+) A-I      intronic chr1:17877062(+) A-I      intronic chr1:17946609(+) A-I      intronic chr1:17884044(+) A-I      intronic chr1:17928121(+) A-I      intronic chr1:17881269(+) A-I      intronic chr1:17868092(+) A-I      intronic chr1:17946643(+) A-I      intronic chr1:17923396(+) A-I      intronic chr1:17905035(+) A-I      intronic chr1:17881321(+) A-I      intronic chr1:17880095(+) A-I      intronic chr1:17881215(+) A-I      intronic chr1:17907670(+) A-I      intronic chr1:17910476(+) A-I      intronic chr1:17924726(+) A-I      intronic chr1:17962661(+) A-I      intronic chr1:17907757(+) A-I      intronic chr1:17925694(+) A-I      intronic chr1:17917877(+) A-I      intronic chr1:17946508(+) A-I      intronic chr1:17910745(+) A-I      intronic chr1:17878926(+) A-I      intronic chr1:17918317(+) A-I      intronic chr1:17909464(+) A-I      intronic chr1:17984736(+) A-I      intronic chr1:17894046(+) A-I      intronic chr1:17946506(+) A-I      intronic chr1:17909609(+) A-I      intronic chr1:17924697(+) A-I      intronic chr1:17946420(+) A-I      intronic chr1:17881220(+) A-I      intronic chr1:17927380(+) A-I      intronic chr1:17907687(+) A-I      intronic chr1:17927398(+) A-I      intronic chr1:17883740(+) A-I      intronic chr1:17905120(+) A-I      intronic chr1:17889859(+) A-I      intronic chr1:17917824(+) A-I      intronic chr1:17879019(+) A-I      intronic chr1:17883580(+) A-I      intronic chr1:17881308(+) A-I      intronic chr1:17947950(+) A-I      intronic chr1:17925732(+) A-I      intronic chr1:17894098(+) A-I      intronic chr1:17898309(+) A-I      intronic chr1:17868093(+) A-I      intronic chr1:17876883(+) A-I      intronic chr1:17910730(+) A-I      intronic chr1:17881366(+) A-I      intronic chr1:17894084(+) A-I      intronic chr1:17923361(+) A-I      intronic chr1:17909528(+) A-I      intronic chr1:17879033(+) A-I      intronic chr1:17917227(+) A-I      intronic chr1:17917394(+) A-I      intronic chr1:17924859(+) A-I      intronic chr1:17917362(+) A-I      intronic chr1:17881360(+) A-I      intronic chr1:17868573(+) A-I      intronic chr1:17869900(+) A-I      intronic chr1:17948002(+) A-I      intronic chr1:17946618(+) A-I      intronic chr1:17924794(+) A-I      intronic chr1:17924858(+) A-I      intronic chr1:17888750(+) A-I      intronic chr1:17870212(+) A-I      intronic chr1:17878918(+) A-I      intronic chr1:17946639(+) A-I      intronic chr1:17989955(+) A-I      intronic chr1:17890004(+) A-I      intronic chr1:17907701(+) A-I      intronic chr1:17878119(+) A-I      intronic chr1:17909584(+) A-I      intronic chr1:17881976(+) A-I      intronic chr1:17880076(+) A-I      intronic chr1:17883618(+) A-I      intronic chr1:17917769(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ARHGEF10L	chr1:17941746(+) A-I intron -    19478186 chr1:17946420(+) A-I intron -    15342557 chr1:17946506(+) A-I intron -    15342557 chr1:17946508(+) A-I intron -    15342557 chr1:17946609(+) A-I intron -    15342557 chr1:17946618(+) A-I intron -    15342557 chr1:17946639(+) A-I intron -    15342557 chr1:17946643(+) A-I intron -    15342557 chr1:17869900(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARHGEF10L	chr1:17934308-17934309(+) m6A CDS       - chr1:17934359-17934360(+) m6A CDS       - chr1:17934401-17934402(+) m6A CDS       24284625//25456834 chr1:17939562-17939563(+) m6A CDS//intron       - chr1:17939594-17939595(+) m6A CDS//intron       - chr1:17942621-17942622(+) m6A CDS//exon       - chr1:17942642-17942643(+) m6A CDS//exon       - chr1:18023471-18023472(+) m6A 3'UTR//CDS//exon       24284625//25456834 chr1:18023834-18023835(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:18023947-18023948(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:18023958-18023959(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:18023976-18023977(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr1:18023987-18023988(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:18024011-18024012(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085 chr1:18024081-18024082(+) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085 chr1:18024121-18024122(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chr1:18024128-18024129(+) m6A 3'UTR//exon       25456834//24981863 chr1:18024179-18024180(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARHGEF10L	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: ARHGEF10L

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg