Basic Information:

  VIRBase ID:  

VHID00340187

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          SLCO4A1:  NM_016354     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	SLCO4A1
miRBase Accession/Entrez ID	MIMAT0003422	28231
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	OATP-E//OATP1//OATP4A1//OATPE//OATPRP1//POAT//SLC21A12

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLCO4A1	chr20:61287828-61287829(+) m6A CDS       24284625//24209618//25456834//22575960 chr20:61287963-61287964(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr20:61288019-61288020(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr20:61288458-61288459(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr20:61292466-61292467(+) m6A CDS       24284625//22575960 chr20:61292496-61292497(+) m6A CDS       24284625//22575960 chr20:61292507-61292508(+) m6A CDS       24284625//22575960 chr20:61292517-61292518(+) m6A CDS       24284625//22575960 chr20:61296308-61296309(+) m6A CDS       24284625//22575960 chr20:61297788-61297789(+) m6A CDS//exon       24284625 chr20:61298831-61298832(+) m6A exon//intron       24284625 chr20:61298907-61298908(+) m6A exon//intron       24284625 chr20:61299119-61299120(+) m6A CDS//exon//intron       24284625 chr20:61299162-61299163(+) m6A CDS//exon//intron       24284625 chr20:61301362-61301363(+) m6A exon//intron       24284625 chr20:61301432-61301433(+) m6A exon//intron       24209618 chr20:61301478-61301479(+) m6A exon//intron       24209618 chr20:61303176-61303177(+) m6A 3'UTR//CDS//exon//intron       24284625//24981863//22575960 chr20:61303300-61303301(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085 chr20:61303332-61303333(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960//22608085 chr20:61303431-61303432(+) m6A 3'UTR//exon//intron       24284625 chr20:61303455-61303456(+) m6A 3'UTR//exon//intron       24284625 chr20:61303525-61303526(+) m6A 3'UTR//intron       24284625 chr20:61316941-61316942(+) m6A exon       25456834 chr20:61317010-61317011(+) m6A exon       25456834 chr20:61317048-61317049(+) m6A exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLCO4A1	Chromatin HeLa-S3 cells|K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: SLCO4A1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg