Basic Information:

  VIRBase ID:  

VHID00340168

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          FOXP1:  NR_146143     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	FOXP1
miRBase Accession/Entrez ID	MIMAT0003422	27086
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	12CC4//hFKH1B//HSPC215//MFH//QRF1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FOXP1	chr3:71472601(-) A-I      intronic chr3:71329616(-) A-I      intronic chr3:71330989(-) A-I      intronic chr3:71339003(-) A-I      intronic chr3:71339016(-) A-I      intronic chr3:71339017(-) A-I      intronic chr3:71341564(-) A-I      intronic chr3:71342556(-) A-I      intronic chr3:71342566(-) A-I      intronic chr3:71342568(-) A-I      intronic chr3:71342593(-) A-I      intronic chr3:71362482(-) A-I      intronic chr3:71362491(-) A-I      intronic chr3:71376810(-) A-I      intronic chr3:71376811(-) A-I      intronic chr3:71612756(-) A-I      intronic chr3:71396050(-) A-I      intronic chr3:71431251(-) A-I      intronic chr3:71452907(-) A-I      intronic chr3:71452916(-) A-I      intronic chr3:71452918(-) A-I      intronic chr3:71452955(-) A-I      intronic chr3:71453375(-) A-I      intronic chr3:71453381(-) A-I      intronic chr3:71453385(-) A-I      intronic chr3:71453390(-) A-I      intronic chr3:71453416(-) A-I      intronic chr3:71453417(-) A-I      intronic chr3:71453419(-) A-I      intronic chr3:71453451(-) A-I      intronic chr3:71453453(-) A-I      intronic chr3:71453481(-) A-I      intronic chr3:71470050(-) A-I      intronic chr3:71486482(-) A-I      intronic chr3:71509519(-) A-I      intronic chr3:71510709(-) A-I      intronic chr3:71528667(-) A-I      intronic chr3:71539610(-) A-I      intronic chr3:71568194(-) A-I      intronic chr3:71568234(-) A-I      intronic chr3:71568273(-) A-I      intronic chr3:71378435(-) A-I      intronic chr3:71378442(-) A-I      intronic chr3:71378505(-) A-I      intronic chr3:71378573(-) A-I      intronic chr3:71378577(-) A-I      intronic chr3:71390767(-) A-I      intronic chr3:71417361(-) A-I      intronic chr3:71417470(-) A-I      intronic chr3:71430794(-) A-I      intronic chr3:71430799(-) A-I      intronic chr3:71431240(-) A-I      intronic chr3:71614188(-) A-I      intronic chr3:71231809(-) A-I      intronic chr3:71608964(-) A-I      intronic chr3:71608951(-) A-I      intronic chr3:71608903(-) A-I      intronic chr3:71608760(-) A-I      intronic chr3:71607053(-) A-I      intronic chr3:71598637(-) A-I      intronic chr3:71598622(-) A-I      intronic chr3:71598548(-) A-I      intronic chr3:71581327(-) A-I      intronic chr3:71568285(-) A-I      intronic chr3:71248488(-) A-I      intronic chr3:71248473(-) A-I      intronic chr3:71248472(-) A-I      intronic chr3:71248459(-) A-I      intronic chr3:71227119(-) A-I      intronic chr3:71227108(-) A-I      intronic chr3:71227076(-) A-I      intronic chr3:71227061(-) A-I      intronic chr3:71227053(-) A-I      intronic chr3:71227050(-) A-I      intronic chr3:71157808(-) A-I      intronic chr3:71157795(-) A-I      intronic chr3:71157782(-) A-I      intronic chr3:71157759(-) A-I      intronic chr3:71134964(-) A-I      intronic chr3:71134949(-) A-I      intronic chr3:71134948(-) A-I      intronic chr3:71134943(-) A-I      intronic chr3:71610407(-) A-I      intronic chr3:71608886(-) A-I      intronic chr3:71539597(-) A-I      intronic chr3:71510830(-) A-I      intronic chr3:71308031(-) A-I      intronic chr3:71121431(-) A-I      intronic chr3:71625743(-) A-I      intronic chr3:71010982(-) A-I      intronic chr3:71010987(-) A-I      intronic chr3:71043037(-) A-I      intronic chr3:71068943(-) A-I      intronic chr3:71120862(-) A-I      intronic chr3:71134051(-) A-I      intronic chr3:71134992(-) A-I      intronic chr3:71155505(-) A-I      intronic chr3:71156000(-) A-I      intronic chr3:71156017(-) A-I      intronic chr3:71156026(-) A-I      intronic chr3:71157737(-) A-I      intronic chr3:71157773(-) A-I      intronic chr3:71157878(-) A-I      intronic chr3:71224201(-) A-I      intronic chr3:71227077(-) A-I      intronic chr3:71227204(-) A-I      intronic chr3:71227534(-) A-I      intronic chr3:71231778(-) A-I      intronic chr3:71231783(-) A-I      intronic chr3:71231786(-) A-I      intronic chr3:71231819(-) A-I      intronic chr3:71231877(-) A-I      intronic chr3:71232567(-) A-I      intronic chr3:71233060(-) A-I      intronic chr3:71233181(-) A-I      intronic chr3:71233220(-) A-I      intronic chr3:71233296(-) A-I      intronic chr3:71236472(-) A-I      intronic chr3:71242329(-) A-I      intronic chr3:71242334(-) A-I      intronic chr3:71249144(-) A-I      intronic chr3:71271192(-) A-I      intronic chr3:71271258(-) A-I      intronic chr3:71271771(-) A-I      intronic chr3:71271774(-) A-I      intronic chr3:71271783(-) A-I      intronic chr3:71306654(-) A-I      intronic chr3:71309908(-) A-I      intronic chr3:71315498(-) A-I      intronic chr3:71315499(-) A-I      intronic chr3:71317353(-) A-I      intronic chr3:71317406(-) A-I      intronic chr3:71326221(-) A-I      intronic chr3:71326382(-) A-I      intronic chr3:71327727(-) A-I      intronic chr3:71329595(-) A-I      intronic chr3:71329609(-) A-I      intronic chr3:71227480(-) A-I      intronic chr3:71619072(-) A-I      intronic chr3:71289767(-) A-I      intronic chr3:71227167(-) A-I      intronic chr3:71326238(-) A-I      intronic chr3:71430706(-) A-I      intronic chr3:71449725(-) A-I      intronic chr3:71337312(-) A-I      intronic chr3:71607079(-) A-I      intronic chr3:71125010(-) A-I      intronic chr3:71417505(-) A-I      intronic chr3:71435863(-) A-I      intronic chr3:71378445(-) A-I      intronic chr3:71157660(-) A-I      intronic chr3:71271685(-) A-I      intronic chr3:71134452(-) A-I      intronic chr3:71453479(-) A-I      intronic chr3:71233300(-) A-I      intronic chr3:71392859(-) A-I      intronic chr3:71510691(-) A-I      intronic chr3:71134504(-) A-I      intronic chr3:71227923(-) A-I      intronic chr3:71224224(-) A-I      intronic chr3:71134073(-) A-I      intronic chr3:71435770(-) A-I      intronic chr3:71420177(-) A-I      intronic chr3:71213547(-) A-I      intronic chr3:71134546(-) A-I      intronic chr3:71271707(-) A-I      intronic chr3:71134056(-) A-I      intronic chr3:71227886(-) A-I      intronic chr3:71435729(-) A-I      intronic chr3:71134500(-) A-I      intronic chr3:71453545(-) A-I      intronic chr3:71550715(-) A-I      intronic chr3:71362483(-) A-I      intronic chr3:71308098(-) A-I      intronic chr3:71249186(-) A-I      intronic chr3:71435624(-) A-I      intronic chr3:71271773(-) A-I      intronic chr3:71133980(-) A-I      intronic chr3:71134072(-) A-I      intronic chr3:71435884(-) A-I      intronic chr3:71452752(-) A-I      intronic chr3:71227715(-) A-I      intronic chr3:71271686(-) A-I      intronic chr3:71430792(-) A-I      intronic chr3:71248475(-) A-I      intronic chr3:71134502(-) A-I      intronic chr3:71227491(-) A-I      intronic chr3:71227135(-) A-I      intronic chr3:71509876(-) A-I      intronic chr3:71540331(-) A-I      intronic chr3:71290352(-) A-I      intronic chr3:71326381(-) A-I      intronic chr3:71475957(-) A-I      intronic chr3:71315658(-) A-I      intronic chr3:71453443(-) A-I      intronic chr3:71317382(-) A-I      intronic chr3:71271294(-) A-I      intronic chr3:71135029(-) A-I      intronic chr3:71133927(-) A-I      intronic chr3:71453496(-) A-I      intronic chr3:71134581(-) A-I      intronic chr3:71327925(-) A-I      intronic chr3:71156199(-) A-I      intronic chr3:71377880(-) A-I      intronic chr3:71331082(-) A-I      intronic chr3:71326314(-) A-I      intronic chr3:71233059(-) A-I      intronic chr3:71231878(-) A-I      intronic chr3:71011047(-) A-I      intronic chr3:71608786(-) A-I      intronic chr3:71241977(-) A-I      intronic chr3:71156022(-) A-I      intronic chr3:71550716(-) A-I      intronic chr3:71435707(-) A-I      intronic chr3:71134021(-) A-I      intronic chr3:71242764(-) A-I      intronic chr3:71157754(-) A-I      intronic chr3:71452890(-) A-I      intronic chr3:71326365(-) A-I      intronic chr3:71317338(-) A-I      intronic chr3:71598623(-) A-I      intronic chr3:71603311(-) A-I      intronic chr3:71607064(-) A-I      intronic chr3:71248370(-) A-I      intronic chr3:71396101(-) A-I      intronic chr3:71510904(-) A-I      intronic chr3:71227434(-) A-I      intronic chr3:71363664(-) A-I      intronic chr3:71378642(-) A-I      intronic chr3:71068736(-) A-I      intronic chr3:71226113(-) A-I      intronic chr3:71266412(-) A-I      intronic chr3:71134588(-) A-I      intronic chr3:71010632(-) A-I      intronic chr3:71540290(-) A-I      intronic chr3:71289748(-) A-I      intronic chr3:71227163(-) A-I      intronic chr3:71430482(-) A-I      intronic chr3:71010977(-) A-I      intronic chr3:71224161(-) A-I      intronic chr3:71135107(-) A-I      intronic chr3:71134547(-) A-I      intronic chr3:71476055(-) A-I      intronic chr3:71248384(-) A-I      intronic chr3:71326215(-) A-I      intronic chr3:71327810(-) A-I      intronic chr3:71184244(-) A-I      intronic chr3:71230970(-) A-I      intronic chr3:71512463(-) A-I      intronic chr3:71227184(-) A-I      intronic chr3:71430798(-) A-I      intronic chr3:71010520(-) A-I      intronic chr3:71125059(-) A-I      intronic chr3:71453341(-) A-I      intronic chr3:71338890(-) A-I      intronic chr3:71011032(-) A-I      intronic chr3:71134458(-) A-I      intronic chr3:71430485(-) A-I      intronic chr3:71327897(-) A-I      intronic chr3:71430733(-) A-I      intronic chr3:71603281(-) A-I      intronic chr3:71331085(-) A-I      intronic chr3:71433134(-) A-I      intronic chr3:71306624(-) A-I      intronic chr3:71509764(-) A-I      intronic chr3:71227490(-) A-I      intronic chr3:71309893(-) A-I      intronic chr3:71430466(-) A-I      intronic chr3:71336547(-) A-I      intronic chr3:71452755(-) A-I      intronic chr3:71227064(-) A-I      intronic chr3:71134018(-) A-I      intronic chr3:71430759(-) A-I      intronic chr3:71213544(-) A-I      intronic chr3:71452942(-) A-I      intronic chr3:71157751(-) A-I      intronic chr3:71476090(-) A-I      intronic chr3:71135009(-) A-I      intronic chr3:71248457(-) A-I      intronic chr3:71282290(-) A-I      intronic chr3:71120926(-) A-I      intronic chr3:71370833(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FOXP1	chr3:71271642(-) A-I intron -    15342557 chr3:71271685(-) A-I intron -    15342557 chr3:71271686(-) A-I intron -    15342557 chr3:71271698(-) A-I intron -    15342557 chr3:71271707(-) A-I intron -    15342557 chr3:71271763(-) A-I intron -    15342557 chr3:71271773(-) A-I intron -    15342557 chr3:71429867(-) A-I intron -    15342557 chr3:71430413(-) A-I intron -    15342557 chr3:71430466(-) A-I intron -    15342557 chr3:71430485(-) A-I intron -    15342557 chr3:71431331(-) A-I intron -    15342557 chr3:71433134(-) A-I intron -    15342557 chr3:71433202(-) A-I intron -    15342557 chr3:71435624(-) A-I intron -    15342557 chr3:71435646(-) A-I intron -    15342557 chr3:71435707(-) A-I intron -    15342557 chr3:71435729(-) A-I intron -    15342557 chr3:71435770(-) A-I intron -    15342557 chr3:71435812(-) A-I intron -    15342557 chr3:71435863(-) A-I intron -    15342557 chr3:71435884(-) A-I intron -    15342557 chr3:71010977(-) A-I intron -    21960545 chr3:71010994(-) A-I intron -    21960545 chr3:71011047(-) A-I intron -    21960545 chr3:71134072(-) A-I intron -    21960545 chr3:71134458(-) A-I intron -    21960545 chr3:71134504(-) A-I intron -    21960545 chr3:71134541(-) A-I intron -    21960545 chr3:71134581(-) A-I intron -    21960545 chr3:71143406(-) A-I intron -    21960545 chr3:71143408(-) A-I intron -    21960545 chr3:71241961(-) A-I intron -    21960545 chr3:71308098(-) A-I intron -    21960545 chr3:71309298(-) A-I intron -    21960545 chr3:71312993(-) A-I intron -    21960545 chr3:71317406(-) A-I intron -    21960545 chr3:71327013(-) A-I intron -    21960545 chr3:71327769(-) A-I intron -    21960545 chr3:71381730(-) A-I intron -    21960545 chr3:71451592(-) A-I intron -    21960545 chr3:71627355(-) A-I intron -    21960545 chr3:71133966(-) A-G intron -    22484847 chr3:71134056(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FOXP1	chr3:71006357-71006358(-) m6A 3'UTR       24981863//26404942 chr3:71006406-71006407(-) m6A 3'UTR       24981863//26404942 chr3:71006412-71006413(-) m6A 3'UTR       24981863//26404942 chr3:71007068-71007069(-) m6A 3'UTR       27773535 chr3:71007140-71007141(-) m6A 3'UTR       27773535 chr3:71007219-71007220(-) m6A 3'UTR       27773535 chr3:71007256-71007257(-) m6A 3'UTR       24981863//27773535 chr3:71007300-71007301(-) m6A 3'UTR       24981863//27773535 chr3:71007443-71007444(-) m6A 3'UTR       24981863 chr3:71007456-71007457(-) m6A 3'UTR       24981863 chr3:71007817-71007818(-) m6A 3'UTR       24981863//27773535 chr3:71008002-71008003(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:71008044-71008045(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:71008066-71008067(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:71008073-71008074(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:71008095-71008096(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:71008158-71008159(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22575960//22608085 chr3:71008232-71008233(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr3:71008341-71008342(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr3:71008407-71008408(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr3:71008421-71008422(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22608085 chr3:71019935-71019936(-) m6A 3'UTR//CDS//exon//intron       27773535 chr3:71021182-71021183(-) m6A 3'UTR//CDS//intron       27773535 chr3:71021258-71021259(-) m6A 3'UTR//CDS//intron       27773535 chr3:71026826-71026827(-) m6A CDS//exon       27773535 chr3:71026857-71026858(-) m6A CDS//exon       27773535 chr3:71027004-71027005(-) m6A CDS//exon       24981863//27773535 chr3:71027027-71027028(-) m6A CDS//exon       24981863//27773535 chr3:71037165-71037166(-) m6A CDS       24284625//24981863//27773535 chr3:71037217-71037218(-) m6A CDS       24284625//27773535 chr3:71090510-71090511(-) m6A CDS       27773535 chr3:71090532-71090533(-) m6A CDS       27773535 chr3:71090548-71090549(-) m6A CDS       27773535 chr3:71090617-71090618(-) m6A CDS       27773535 chr3:71090666-71090667(-) m6A CDS       27773535 chr3:71114045-71114046(-) m6A 5'UTR//intron       27773535 chr3:71161770-71161771(-) m6A CDS       24981863 chr3:71179663-71179664(-) m6A CDS//intron       24981863 chr3:71179686-71179687(-) m6A CDS//intron       24981863 chr3:71179723-71179724(-) m6A CDS//intron       24981863 chr3:71179732-71179733(-) m6A CDS//intron       24981863 chr3:71179771-71179772(-) m6A CDS//intron       24981863 chr3:71247205-71247206(-) m6A CDS//intron       - chr3:71247398-71247399(-) m6A CDS       24981863 chr3:71247507-71247508(-) m6A CDS       24981863 chr3:71247513-71247514(-) m6A CDS       - chr3:71294011-71294012(-) m6A 5'UTR//intron       - chr3:71409700-71409701(-) m6A exon//intron       - chr3:71630769-71630770(-) m6A 5'UTR//exon//intron       24209618 chr3:71630832-71630833(-) Am 5'UTR//exon//intron       - chr3:71630846-71630847(-) m6A 5'UTR//exon//intron       24209618 chr3:71630885-71630886(-) m6A exon//intron       - chr3:71632756-71632757(-) m6A 5'UTR//exon//intron       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FOXP1	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: FOXP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg