Detail Information

Basic Information:


  VIRBase ID:  

VHID00339831

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:           ZBTB39:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART11-3p ZBTB39
miRBase
Accession/Entrez ID		 MIMAT0003422 9880
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - ZNF922

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZBTB39
chr12:57392731-57392732(-) m6A 3'UTR       27773535
chr12:57392841-57392842(-) m6A 3'UTR       27773535
chr12:57393953-57393954(-) m6A 3'UTR       27773535
chr12:57393991-57393992(-) m6A 3'UTR       27773535
chr12:57394514-57394515(-) m6A 3'UTR       24981863
chr12:57394558-57394559(-) m6A 3'UTR       24981863
chr12:57395547-57395548(-) m6A 3'UTR       24981863
chr12:57395573-57395574(-) m6A 3'UTR       24981863
chr12:57395750-57395751(-) m6A 3'UTR       24284625//25456834
chr12:57395813-57395814(-) m6A 3'UTR       24284625//25456834//27773535//22608085
chr12:57395851-57395852(-) m6A 3'UTR       25456834//27773535//22608085
chr12:57395909-57395910(-) m6A 3'UTR       24284625//25456834//27773535//22608085
chr12:57395985-57395986(-) m6A 3'UTR       24284625//25456834//27773535//22608085
chr12:57396036-57396037(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr12:57396041-57396042(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr12:57396086-57396087(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr12:57396569-57396570(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57396575-57396576(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57396615-57396616(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57396667-57396668(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57396741-57396742(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57396896-57396897(-) m6A CDS       24284625//24981863//27773535//22608085
chr12:57397274-57397275(-) m6A CDS       22608085
chr12:57397424-57397425(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397482-57397483(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397547-57397548(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397553-57397554(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397566-57397567(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397598-57397599(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57397607-57397608(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57397778-57397779(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397808-57397809(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397884-57397885(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57397898-57397899(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57397928-57397929(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397940-57397941(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57397986-57397987(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57398069-57398070(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57398076-57398077(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57398189-57398190(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57398210-57398211(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr12:57398227-57398228(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr12:57398248-57398249(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr12:57398363-57398364(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr12:57398417-57398418(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr12:57398428-57398429(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr12:57398483-57398484(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57398496-57398497(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:57398531-57398532(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr12:57398619-57398620(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr12:57398644-57398645(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085
chr12:57398683-57398684(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZBTB39
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART11-3p
Nvp-aew541       11476171

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART11-3p
Interactor2: ZBTB39

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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