Basic Information:

  VIRBase ID:  

VHID00339664

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          BHLHE40:  NM_003670     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	BHLHE40
miRBase Accession/Entrez ID	MIMAT0003422	8553
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BHLHB2//Clast5//DEC1//HLHB2//SHARP-2//SHARP2//STRA13//Stra14

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BHLHE40	chr3:5020884-5020885(+) m6A 5'UTR       24209618 chr3:5020971-5020972(+) m6A 5'UTR       24209618//24981863 chr3:5021145-5021146(+) m6A 5'UTR//exon       24284625//24981863//26404942//27371828 chr3:5021209-5021210(+) m6A 5'UTR//exon       24284625//24981863//26404942//27371828//22575960 chr3:5021292-5021293(+) m6A 5'UTR//exon       24284625//24981863//26404942//27371828//22575960 chr3:5021302-5021303(+) m6A 5'UTR//exon       24284625//24981863//26404942//27371828//22575960 chr3:5021316-5021317(+) m6A 5'UTR//exon       24284625//24981863//26404942//27371828 chr3:5021369-5021370(+) m6A 5'UTR//exon       24284625//24981863//27371828 chr3:5021459-5021460(+) m6A CDS//exon       24284625//24981863 chr3:5021473-5021474(+) m6A CDS//exon       24284625//24981863//22575960 chr3:5021708-5021709(+) m6A CDS//exon       24284625//24981863 chr3:5021738-5021739(+) m6A exon//intron       24284625//24981863 chr3:5021907-5021908(+) m6A exon//intron       24284625//24209618//24981863 chr3:5022077-5022078(+) m6A CDS//exon       26404942 chr3:5022086-5022087(+) m6A CDS//exon       26404942 chr3:5023111-5023112(+) m6A CDS//exon       26404942 chr3:5023143-5023144(+) m6A CDS//exon       26404942 chr3:5024546-5024547(+) m6A CDS//exon       24284625//24981863//22575960 chr3:5024579-5024580(+) m6A CDS//exon       24284625//24209618//24981863//22575960 chr3:5024622-5024623(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:5024631-5024632(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:5024715-5024716(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:5024736-5024737(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5024749-5024750(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5024790-5024791(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5024813-5024814(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5024856-5024857(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5024862-5024863(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5024989-5024990(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr3:5025006-5025007(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:5025237-5025238(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:5025243-5025244(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:5025277-5025278(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:5025357-5025358(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:5025365-5025366(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:5025372-5025373(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:5025377-5025378(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:5025583-5025584(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960 chr3:5025639-5025640(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960 chr3:5025843-5025844(+) m6A 3'UTR       24284625//24981863 chr3:5025907-5025908(+) m6A 3'UTR       24284625 chr3:5026065-5026066(+) m6A 3'UTR       24284625 chr3:5026176-5026177(+) m6A 3'UTR       24284625//26404942 chr3:5026181-5026182(+) m6A 3'UTR       24284625//26404942 chr3:5026202-5026203(+) m6A 3'UTR       24284625//26404942 chr3:5026260-5026261(+) m6A 3'UTR       24284625//26404942 chr3:5026265-5026266(+) m6A 3'UTR       24284625//26404942 chr3:5026270-5026271(+) m6A 3'UTR       24284625//26404942 chr3:5026295-5026296(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BHLHE40	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: BHLHE40

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg