Detail Information

Basic Information:


  VIRBase ID:  

VHID00339649

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:           UBL4A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART11-3p UBL4A
miRBase
Accession/Entrez ID		 MIMAT0003422 8266
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - DX254E//DXS254E//G6PD//GDX//GET5//MDY2//TMA24//UBL4

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UBL4A
chrX:153712076-153712077(-) m6A 3'UTR       24284625//27773535
chrX:153712531-153712532(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chrX:153712618-153712619(-) Am 3'UTR       -
chrX:153712636-153712637(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085
chrX:153712834-153712835(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chrX:153712921-153712922(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chrX:153712983-153712984(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chrX:153713038-153713039(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chrX:153713200-153713201(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chrX:153713280-153713281(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chrX:153713430-153713431(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chrX:153713903-153713904(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chrX:153714121-153714122(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chrX:153714256-153714257(-) m6A 3'UTR//CDS//exon       24284625//27773536
chrX:153714340-153714341(-) m6A CDS//exon//intron       24284625//27773536
chrX:153714520-153714521(-) m6A exon//intron       24284625//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate UBL4A
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus K562 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART11-3p
Nvp-aew541       11476171

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART11-3p
Interactor2: UBL4A

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...