Detail Information

Basic Information:


  VIRBase ID:  

VHID00339528

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:           SOX3:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART11-3p SOX3
miRBase
Accession/Entrez ID
MIMAT0003422 6658
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - GHDX//MRGH//PHP//PHPX//SOXB

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SOX3
chrX:139585684-139585685(-) m6A 3'UTR       25456834
chrX:139585783-139585784(-) m6A 3'UTR       25456834//24981863
chrX:139585922-139585923(-) m6A CDS       25456834
chrX:139586449-139586450(-) m6A CDS       25456834
chrX:139586585-139586586(-) m6A CDS       24981863
chrX:139586611-139586612(-) m6A CDS       25456834//24981863
chrX:139586691-139586692(-) m6A CDS       25456834
chrX:139586743-139586744(-) m6A CDS       25456834
chrX:139586815-139586816(-) m6A CDS       25456834//24981863
chrX:139586821-139586822(-) m6A CDS       25456834//24981863
chrX:139586872-139586873(-) m6A CDS       25456834//24981863
chrX:139586957-139586958(-) m6A CDS       25456834//24981863
chrX:139586968-139586969(-) m6A CDS       25456834//24981863
chrX:139586976-139586977(-) m6A CDS       25456834//24981863
chrX:139586981-139586982(-) m6A CDS       25456834//24981863
chrX:139587127-139587128(-) m6A CDS       25456834
chrX:139587205-139587206(-) m6A CDS       25456834//24981863

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART11-3p

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART11-3p
Interactor2: SOX3

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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