Basic Information:

  VIRBase ID:  

VHID00339310

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-3p:  MIMAT0003422          LLGL1:  NM_004140     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-3p	LLGL1
miRBase Accession/Entrez ID	MIMAT0003422	3996
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DLG4//HUGL//HUGL-1//HUGL1//Lgl1//LLGL//Mgl1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LLGL1	chr17:18147577(+) A-I      3'UTR chr17:18147847(+) A-I      3'UTR chr17:18142331(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LLGL1	chr17:18140401-18140402(+) m6A exon//intron       - chr17:18140454-18140455(+) m6A exon//intron       - chr17:18144248-18144249(+) m6A exon//intron       - chr17:18144258-18144259(+) m6A exon//intron       - chr17:18144269-18144270(+) m6A exon//intron       - chr17:18144300-18144301(+) m6A exon//intron       - chr17:18144326-18144327(+) m6A exon//intron       - chr17:18144346-18144347(+) m6A exon//intron       - chr17:18145073-18145074(+) m6A exon//intron       - chr17:18145083-18145084(+) m6A exon//intron       - chr17:18147308-18147309(+) m6A 3'UTR//exon       24284625 chr17:18147340-18147341(+) m6A 3'UTR//exon       24284625//24981863 chr17:18147407-18147408(+) m6A 3'UTR//exon       25456834//24981863 chr17:18147419-18147420(+) m6A 3'UTR//exon       25456834//24981863 chr17:18147476-18147477(+) m6A 3'UTR//exon       25456834//24981863 chr17:18147691-18147692(+) m6A 3'UTR//exon       24209618//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	LLGL1	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART11-3p	Nvp-aew541       11476171

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-3p
Interactor2: LLGL1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg