Basic Information:

  VIRBase ID:  

VHID00338407

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-5p:  MIMAT0003421          TMEM30B:  NM_001017970     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-5p	TMEM30B
miRBase Accession/Entrez ID	MIMAT0003421	161291
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CDC50B

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM30B	chr14:61745128-61745129(-) m6A 3'UTR       27773535 chr14:61745137-61745138(-) m6A 3'UTR       27773535 chr14:61745169-61745170(-) m6A 3'UTR       27773535 chr14:61745175-61745176(-) m6A 3'UTR       27773535 chr14:61746242-61746243(-) m6A 3'UTR       24981863 chr14:61746254-61746255(-) m6A 3'UTR       25456834//24981863 chr14:61746261-61746262(-) m6A 3'UTR       25456834//24981863 chr14:61746294-61746295(-) m6A 3'UTR       25456834//24981863//27773535 chr14:61746469-61746470(-) m6A 3'UTR       25456834//24981863//27773535 chr14:61746496-61746497(-) m6A 3'UTR       25456834//24981863//27773535 chr14:61746507-61746508(-) m6A 3'UTR       25456834//24981863//27773535 chr14:61746586-61746587(-) m6A 3'UTR       25456834//24981863//27773535//27371828 chr14:61746598-61746599(-) m6A 3'UTR//exon       25456834//24981863//27773535//27371828 chr14:61746638-61746639(-) m6A 3'UTR//exon       25456834//24981863//27773535//27371828 chr14:61746682-61746683(-) m6A 3'UTR//exon       25456834//24981863//27371828 chr14:61746770-61746771(-) m6A 3'UTR//exon       25456834//24981863 chr14:61746834-61746835(-) m6A CDS//exon       25456834 chr14:61746924-61746925(-) m6A CDS//exon       25456834 chr14:61747073-61747074(-) m6A CDS//exon       25456834//24981863 chr14:61747119-61747120(-) m6A CDS//exon       25456834//24981863 chr14:61747460-61747461(-) m6A CDS//exon       24981863 chr14:61747506-61747507(-) m6A CDS//exon       24981863 chr14:61747970-61747971(-) m6A 5'UTR//intron       25456834 chr14:61747991-61747992(-) m6A 5'UTR//intron       25456834 chr14:61748031-61748032(-) m6A 5'UTR//exon//intron       25456834 chr14:61748036-61748037(-) m6A 5'UTR//exon//intron       25456834 chr14:61748072-61748073(-) m6A 5'UTR//exon//intron       25456834 chr14:61748158-61748159(-) m6A 5'UTR//exon//intron       25456834//24981863 chr14:61748184-61748185(-) m6A 5'UTR//exon       25456834 chr14:61748202-61748203(-) m6A 5'UTR//exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART11-5p	Exosome B cell line (Raji)     21505438
	TMEM30B	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-5p
Interactor2: TMEM30B

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg