Basic Information:

  VIRBase ID:  

VHID00335327

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART11-5p:  MIMAT0003421          FZD3:  NM_017412     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART11-5p	FZD3
miRBase Accession/Entrez ID	MIMAT0003421	7976
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Fz-3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FZD3	chr8:28377734(+) A-I      intronic chr8:28386532(+) A-I      intronic chr8:28386558(+) A-I      intronic chr8:28386574(+) A-I      intronic chr8:28386671(+) A-I      intronic chr8:28391891(+) A-I      intronic chr8:28391909(+) A-I      intronic chr8:28391955(+) A-I      intronic chr8:28397864(+) A-I      intronic chr8:28398229(+) A-I      intronic chr8:28398278(+) A-I      intronic chr8:28398341(+) A-I      intronic chr8:28398342(+) A-I      intronic chr8:28399993(+) A-I      intronic chr8:28400087(+) A-I      intronic chr8:28400991(+) A-I      intronic chr8:28400999(+) A-I      intronic chr8:28408095(+) A-I      intronic chr8:28408109(+) A-I      intronic chr8:28408866(+) A-I      intronic chr8:28398355(+) A-I      intronic chr8:28398382(+) A-I      intronic chr8:28398383(+) A-I      intronic chr8:28401015(+) A-I      intronic chr8:28401067(+) A-I      intronic chr8:28386566(+) A-I      intronic chr8:28366304(+) A-I      intronic chr8:28368732(+) A-I      intronic chr8:28368882(+) A-I      intronic chr8:28391923(+) A-I      intronic chr8:28424624(+) A-I      3'UTR chr8:28424891(+) A-I      3'UTR chr8:28424901(+) A-I      3'UTR chr8:28427849(+) A-I      3'UTR chr8:28427853(+) A-I      3'UTR chr8:28427856(+) A-I      3'UTR chr8:28427858(+) A-I      3'UTR chr8:28424942(+) A-I      3'UTR chr8:28424909(+) A-I      3'UTR chr8:28428154(+) A-I      3'UTR chr8:28428038(+) A-I      3'UTR chr8:28428031(+) A-I      3'UTR chr8:28427731(+) A-I      3'UTR chr8:28427911(+) A-I      3'UTR chr8:28427733(+) A-I      3'UTR chr8:28427982(+) A-I      3'UTR chr8:28428027(+) A-I      3'UTR chr8:28424988(+) A-I      3'UTR chr8:28427859(+) A-I      3'UTR chr8:28427988(+) A-I      3'UTR chr8:28428003(+) A-I      3'UTR chr8:28427737(+) A-I      3'UTR chr8:28427762(+) A-I      3'UTR chr8:28424923(+) A-I      3'UTR chr8:28428054(+) A-I      3'UTR chr8:28424924(+) A-I      3'UTR chr8:28427819(+) A-I      3'UTR chr8:28427830(+) A-I      3'UTR chr8:28427866(+) A-I      3'UTR chr8:28427880(+) A-I      3'UTR chr8:28424914(+) A-I      3'UTR chr8:28427789(+) A-I      3'UTR chr8:28408040(+) A-I      intronic chr8:28397847(+) A-I      intronic chr8:28366262(+) A-I      intronic chr8:28390073(+) A-I      intronic chr8:28398309(+) A-I      intronic chr8:28398315(+) A-I      intronic chr8:28401133(+) A-I      intronic chr8:28386480(+) A-I      intronic chr8:28398255(+) A-I      intronic chr8:28398207(+) A-I      intronic chr8:28424771(+) A-I      3'UTR chr8:28424628(+) A-I      3'UTR chr8:28427894(+) A-I      3'UTR chr8:28424616(+) A-I      3'UTR chr8:28428156(+) A-I      3'UTR chr8:28427980(+) A-I      3'UTR chr8:28427754(+) A-I      3'UTR chr8:28424592(+) A-I      3'UTR chr8:28425057(+) A-I      3'UTR chr8:28424810(+) A-I      3'UTR chr8:28424800(+) A-I      3'UTR chr8:28424732(+) A-I      3'UTR chr8:28424632(+) A-I      3'UTR chr8:28424930(+) A-I      3'UTR chr8:28427983(+) A-I      3'UTR chr8:28424845(+) A-I      3'UTR chr8:28424936(+) A-I      3'UTR chr8:28428062(+) A-I      3'UTR chr8:28428048(+) A-I      3'UTR chr8:28427986(+) A-I      3'UTR chr8:28427753(+) A-I      3'UTR chr8:28427775(+) A-I      3'UTR chr8:28427832(+) A-I      3'UTR chr8:28427956(+) A-I      3'UTR chr8:28427991(+) A-I      3'UTR chr8:28424764(+) A-I      3'UTR chr8:28427895(+) A-I      3'UTR chr8:28424897(+) A-I      3'UTR chr8:28427784(+) A-I      3'UTR chr8:28428063(+) A-I      3'UTR chr8:28424788(+) A-I      3'UTR chr8:28424836(+) A-I      3'UTR chr8:28427888(+) A-I      3'UTR chr8:28427776(+) A-I      3'UTR chr8:28401172(+) A-I      intronic chr8:28404390(+) A-I      intronic chr8:28404377(+) A-I      intronic chr8:28408183(+) A-I      intronic chr8:28408855(+) A-I      intronic chr8:28377607(+) A-I      intronic chr8:28401178(+) A-I      intronic chr8:28394049(+) A-I      intronic chr8:28408121(+) A-I      intronic chr8:28408086(+) A-I      intronic chr8:28366251(+) A-I      intronic chr8:28408148(+) A-I      intronic chr8:28408271(+) A-I      intronic chr8:28397946(+) A-I      intronic chr8:28408945(+) A-I      intronic chr8:28362968(+) A-I      intronic chr8:28368299(+) A-I      intronic chr8:28398206(+) A-I      intronic chr8:28399908(+) A-I      intronic chr8:28408878(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FZD3	chr8:28386480(+) A-G intron -    22484847 chr8:28386483(+) A-G intron -    22484847 chr8:28386533(+) A-G intron -    22484847 chr8:28391949(+) A-G intron -    22484847 chr8:28397847(+) A-G intron -    22484847 chr8:28398200(+) A-G intron -    22484847 chr8:28398206(+) A-G intron -    22484847 chr8:28398207(+) A-G intron -    22484847 chr8:28398310(+) A-G intron -    22484847 chr8:28398315(+) A-G intron -    22484847 chr8:28400937(+) A-G intron -    22484847 chr8:28400972(+) A-G intron -    22484847 chr8:28408040(+) A-G intron -    22484847 chr8:28408086(+) A-G intron -    22484847 chr8:28408855(+) A-G intron -    22484847 chr8:28424800(+) A-G intron -    22484847 chr8:28424930(+) A-G intron -    22484847 chr8:28427784(+) A-G intron -    22484847 chr8:28427832(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FZD3	chr8:28360307-28360308(+) m6A 5'UTR       24981863//22608085 chr8:28360338-28360339(+) m6A 5'UTR       24981863//22608085 chr8:28360345-28360346(+) m6A 5'UTR       24981863//22608085 chr8:28360363-28360364(+) m6A 5'UTR       24981863//22608085 chr8:28360376-28360377(+) m6A 5'UTR       24284625//24981863//22608085 chr8:28360454-28360455(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22608085 chr8:28360519-28360520(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22608085 chr8:28360616-28360617(+) m6A CDS       24284625//24209618//24981863//22608085 chr8:28360698-28360699(+) m6A CDS       24284625//22608085 chr8:28384720-28384721(+) m6A CDS       24284625//24981863//22608085 chr8:28384755-28384756(+) m6A CDS       24284625//24981863//22608085 chr8:28384870-28384871(+) m6A CDS       24981863//22608085 chr8:28385297-28385298(+) m6A CDS       24981863//22608085 chr8:28387978-28387979(+) m5C intron       23604283 chr8:28420350-28420351(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr8:28420419-28420420(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr8:28420516-28420517(+) m6A CDS       24284625//24209618//25456834//24981863//22608085 chr8:28420690-28420691(+) m6A 3'UTR//exon       24981863//22608085 chr8:28420697-28420698(+) m6A 3'UTR//exon       24981863//22608085 chr8:28420714-28420715(+) m6A 3'UTR//exon       24981863//22608085 chr8:28420799-28420800(+) m6A 3'UTR//intron       24981863//22608085 chr8:28420856-28420857(+) m6A 3'UTR//intron       24981863//22608085 chr8:28420873-28420874(+) m6A 3'UTR//intron       24981863//22608085 chr8:28420913-28420914(+) m6A 3'UTR//intron       24981863//22608085 chr8:28420964-28420965(+) m6A 3'UTR//intron       24981863//22608085 chr8:28420972-28420973(+) m6A 3'UTR//intron       24981863//22608085 chr8:28421007-28421008(+) m6A 3'UTR//intron       24981863//22608085 chr8:28421020-28421021(+) m6A 3'UTR//intron       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART11-5p	Exosome B cell line (Raji)     21505438
	FZD3	Exosome Blood     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART11-5p
Interactor2: FZD3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg