Basic Information:

  VIRBase ID:  

VHID00331465

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-3p:  MIMAT0003420          SRP14:  NM_003134     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-3p	SRP14
miRBase Accession/Entrez ID	MIMAT0003420	6727
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALURBP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SRP14	chr15:40328628-40328629(-) m6A CDS//exon       24981863//27773535 chr15:40328637-40328638(-) m6A CDS//exon       24981863//27773535 chr15:40328642-40328643(-) m6A CDS//exon       24981863//27773535 chr15:40328651-40328652(-) m6A CDS//exon       24981863//27773535 chr15:40328690-40328691(-) m6A CDS//exon       24981863//27773535 chr15:40328949-40328950(-) m6A 3'UTR//intron       24981863//27773535 chr15:40329126-40329127(-) m6A CDS//intron       24981863 chr15:40329541-40329542(-) m6A exon//intron       24981863 chr15:40330534-40330535(-) m6A 5'UTR//CDS//exon       24981863 chr15:40330578-40330579(-) m6A 5'UTR//CDS//exon       24981863//27773535//27371828 chr15:40330583-40330584(-) m6A 5'UTR//CDS//exon       24981863//27773535//27371828 chr15:40330711-40330712(-) m6A exon//intron       24284625//24981863//27773535//27371828 chr15:40331079-40331080(-) m1A 5'UTR//CDS//exon//intron       26863196//26863410 chr15:40331128-40331129(-) m6A 5'UTR//CDS//exon//intron       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr15:40331217-40331218(-) m6A 5'UTR//intron       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr15:40331238-40331239(-) m6A 5'UTR//intron       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr15:40331374-40331375(-) m6A 5'UTR       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SRP14	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-3p
Interactor2: SRP14

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg