Basic Information:

  VIRBase ID:  

VHID00331328

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-3p:  MIMAT0003420          PSMA2:  NM_002787     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART10-3p	PSMA2
miRBase Accession/Entrez ID	MIMAT0003420	5683
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HC3//MU//PMSA2//PSC2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PSMA2	chr7:42965909(-) A-I      intronic chr7:42965090(-) A-I      intronic chr7:42965088(-) A-I      intronic chr7:42965083(-) A-I      intronic chr7:42965075(-) A-I      intronic chr7:42965062(-) A-I      intronic chr7:42965950(-) A-I      intronic chr7:42965074(-) A-I      intronic chr7:42965922(-) A-I      intronic chr7:42965046(-) A-I      intronic chr7:42965908(-) A-I      intronic chr7:42965853(-) A-I      intronic chr7:42965845(-) A-I      intronic chr7:42965132(-) A-I      intronic chr7:42965055(-) A-I      intronic chr7:42965056(-) A-I      intronic chr7:42965127(-) A-I      intronic chr7:42965060(-) A-I      intronic chr7:42965126(-) A-I      intronic chr7:42965125(-) A-I      intronic chr7:42965113(-) A-I      intronic chr7:42965104(-) A-I      intronic chr7:42965953(-) A-I      intronic chr7:42965065(-) A-I      intronic chr7:42965069(-) A-I      intronic chr7:42965102(-) A-I      intronic chr7:42965096(-) A-I      intronic chr7:42969991(-) A-I      intronic chr7:42970070(-) A-I      intronic chr7:42967504(-) A-I      intronic chr7:42970146(-) A-I      intronic chr7:42969996(-) A-I      intronic chr7:42970046(-) A-I      intronic chr7:42967474(-) A-I      intronic chr7:42970382(-) A-I      intronic chr7:42967442(-) A-I      intronic chr7:42970039(-) A-I      intronic chr7:42969997(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PSMA2	chr7:42967474(-) A-I intron -    22327324 chr7:42965867(-) A-I intron -    21960545 chr7:42965869(-) A-I intron -    21960545 chr7:42967474(-) A-G intron -    22484847 chr7:42967517(-) C-T intron -    22484847 chr7:42967519(-) C-T intron -    22484847 chr7:42965066(-) A-G intron -    22484847 chr7:42965099(-) A-G intron -    22484847 chr7:42965155(-) A-G intron -    22484847 chr7:42965918(-) A-G intron -    22484847 chr7:42965952(-) A-G intron -    22484847 chr7:42965954(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PSMA2	chr7:42956513-42956514(-) m6A 3'UTR       27773535 chr7:42956522-42956523(-) m6A 3'UTR       27773535 chr7:42956546-42956547(-) m6A 3'UTR       27773535 chr7:42956560-42956561(-) m6A 3'UTR       27773535 chr7:42956604-42956605(-) m6A 3'UTR       27773535 chr7:42956748-42956749(-) m6A 3'UTR       27773535 chr7:42956767-42956768(-) m6A 3'UTR       27773535 chr7:42956801-42956802(-) m6A 3'UTR       24981863//27773535//22608085 chr7:42956936-42956937(-) m6A 3'UTR       24981863//27773535//22608085 chr7:42957014-42957015(-) m6A 3'UTR       27773535//22575960 chr7:42957022-42957023(-) m6A 3'UTR       27773535//22575960 chr7:42957093-42957094(-) m6A 3'UTR       27773535 chr7:42957104-42957105(-) Y 3'UTR//intron       25219674 chr7:42957122-42957123(-) m6A 3'UTR       24981863//27773535 chr7:42957415-42957416(-) m6A 3'UTR//CDS       27773535 chr7:42960639-42960640(-) m6A 3'UTR//intron       27773535 chr7:42960670-42960671(-) m6A 3'UTR//intron       27773535 chr7:42964371-42964372(-) m6A 3'UTR//CDS       26404942 chr7:42966187-42966188(-) m6A 3'UTR//CDS//intron       26404942 chr7:42966232-42966233(-) m6A 3'UTR//CDS//intron       26404942//22575960 chr7:42967045-42967046(-) m6A 3'UTR//CDS//intron       22575960 chr7:42970714-42970715(-) m6A 3'UTR//intron       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PSMA2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART10-3p
Interactor2: PSMA2

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg