Detail Information

Basic Information:


  VIRBase ID:  

VHID00330709

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART10-3p:           AK2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART10-3p AK2
miRBase
Accession/Entrez ID		 MIMAT0003420 204
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - ADK2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR AK2
chr1:33483615(-) A-I      intronic
chr1:33484300(-) A-I      intronic
chr1:33481389(-) A-I      intronic
chr1:33481326(-) A-I      intronic
chr1:33495187(-) A-I      intronic
chr1:33495143(-) A-I      intronic
chr1:33495131(-) A-I      intronic
chr1:33495126(-) A-I      intronic
chr1:33494036(-) A-I      intronic
chr1:33493984(-) A-I      intronic
chr1:33492645(-) A-I      intronic
chr1:33492644(-) A-I      intronic
chr1:33492605(-) A-I      intronic
chr1:33492242(-) A-I      intronic
chr1:33492228(-) A-I      intronic
chr1:33492225(-) A-I      intronic
chr1:33491963(-) A-I      intronic
chr1:33491959(-) A-I      intronic
chr1:33491937(-) A-I      intronic
chr1:33491817(-) A-I      intronic
chr1:33491809(-) A-I      intronic
chr1:33489765(-) A-I      intronic
chr1:33489689(-) A-I      intronic
chr1:33489677(-) A-I      intronic
chr1:33489656(-) A-I      intronic
chr1:33488230(-) A-I      intronic
chr1:33488004(-) A-I      intronic
chr1:33495130(-) A-I      intronic
chr1:33481377(-) A-I      intronic
chr1:33481380(-) A-I      intronic
chr1:33481402(-) A-I      intronic
chr1:33481413(-) A-I      intronic
chr1:33481905(-) A-I      intronic
chr1:33481910(-) A-I      intronic
chr1:33481941(-) A-I      intronic
chr1:33481945(-) A-I      intronic
chr1:33481985(-) A-I      intronic
chr1:33482007(-) A-I      intronic
chr1:33482471(-) A-I      intronic
chr1:33482487(-) A-I      intronic
chr1:33482501(-) A-I      intronic
chr1:33482509(-) A-I      intronic
chr1:33483390(-) A-I      intronic
chr1:33483418(-) A-I      intronic
chr1:33483530(-) A-I      intronic
chr1:33483541(-) A-I      intronic
chr1:33483624(-) A-I      intronic
chr1:33487995(-) A-I      intronic
chr1:33493913(-) A-I      intronic
chr1:33495196(-) A-I      intronic
chr1:33499098(-) A-I      intronic
chr1:33499063(-) A-I      intronic
chr1:33496046(-) A-I      intronic
chr1:33496031(-) A-I      intronic
chr1:33495912(-) A-I      intronic
chr1:33481335(-) A-I      intronic
chr1:33481227(-) A-I      intronic
chr1:33495289(-) A-I      intronic
chr1:33495256(-) A-I      intronic
chr1:33495193(-) A-I      intronic
chr1:33483565(-) A-I      intronic
chr1:33482085(-) A-I      intronic
chr1:33488228(-) A-I      intronic
chr1:33488907(-) A-I      intronic
chr1:33498987(-) A-I      intronic
chr1:33499535(-) A-I      intronic
chr1:33500570(-) A-I      intronic
chr1:33489105(-) A-I      intronic
chr1:33499643(-) A-I      intronic
chr1:33493262(-) A-I      intronic
chr1:33481951(-) A-I      intronic
chr1:33495241(-) A-I      intronic
chr1:33499096(-) A-I      intronic
chr1:33494020(-) A-I      intronic
chr1:33498984(-) A-I      intronic
chr1:33489126(-) A-I      intronic
chr1:33498917(-) A-I      intronic
chr1:33489072(-) A-I      intronic
chr1:33500509(-) A-I      intronic
chr1:33499551(-) A-I      intronic
chr1:33488053(-) A-I      intronic
chr1:33486497(-) A-I      intronic
chr1:33496141(-) A-I      intronic
chr1:33496060(-) A-I      intronic
chr1:33500478(-) A-I      intronic
chr1:33488171(-) A-I      intronic
chr1:33498998(-) A-I      intronic
chr1:33499577(-) A-I      intronic
chr1:33481257(-) A-I      intronic
chr1:33493265(-) A-I      intronic
chr1:33488059(-) A-I      intronic
chr1:33499010(-) A-I      intronic
chr1:33488121(-) A-I      intronic
chr1:33482579(-) A-I      intronic
chr1:33493312(-) A-I      intronic
chr1:33483535(-) A-I      intronic
chr1:33493948(-) A-I      intronic
chr1:33489128(-) A-I      intronic
chr1:33496149(-) A-I      intronic
chr1:33499635(-) A-I      intronic
chr1:33499613(-) A-I      intronic
chr1:33483536(-) A-I      intronic
chr1:33488095(-) A-I      intronic
chr1:33488231(-) A-I      intronic
chr1:33499599(-) A-I      intronic
chr1:33499077(-) A-I      intronic
chr1:33483567(-) A-I      intronic
chr1:33483562(-) A-I      intronic
chr1:33493888(-) A-I      intronic
chr1:33486565(-) A-I      intronic
chr1:33494013(-) A-I      intronic
chr1:33486635(-) A-I      intronic
chr1:33489060(-) A-I      intronic
chr1:33481406(-) A-I      intronic
chr1:33499522(-) A-I      intronic
chr1:33493942(-) A-I      intronic
chr1:33498698(-) A-I      intronic
chr1:33499097(-) A-I      intronic
chr1:33499607(-) A-I      intronic
chr1:33493960(-) A-I      intronic
chr1:33487989(-) A-I      intronic
chr1:33496103(-) A-I      intronic
chr1:33488054(-) A-I      intronic
chr1:33499000(-) A-I      intronic
chr1:33481441(-) A-I      intronic
chr1:33488224(-) A-I      intronic
chr1:33489168(-) A-I      intronic
chr1:33481381(-) A-I      intronic
chr1:33493983(-) A-I      intronic
chr1:33499603(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED AK2
chr1:33499000(-) A-G intron -    22484847
chr1:33499097(-) A-G intron -    22484847
chr1:33499607(-) A-G intron -    22484847
chr1:33499613(-) A-G intron -    22484847
chr1:33499635(-) A-G intron -    22484847
chr1:33500478(-) A-G intron -    22484847
chr1:33500509(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AK2
chr1:33473666-33473667(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960//22608085
chr1:33473696-33473697(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:33473760-33473761(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:33473780-33473781(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:33473790-33473791(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:33473883-33473884(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:33473919-33473920(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:33473939-33473940(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:33473998-33473999(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr1:33474085-33474086(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr1:33474103-33474104(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr1:33474216-33474217(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:33474222-33474223(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr1:33474274-33474275(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960//22608085
chr1:33474279-33474280(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960//22608085
chr1:33474307-33474308(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr1:33474392-33474393(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr1:33474415-33474416(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr1:33474428-33474429(-) m6A 3'UTR       24209618//24981863//27773535//22608085
chr1:33474488-33474489(-) m6A 3'UTR       27773535
chr1:33474497-33474498(-) m6A 3'UTR       27773535
chr1:33475791-33475792(-) Y 3'UTR       26075521
chr1:33475882-33475883(-) m6A 3'UTR       24981863
chr1:33476165-33476166(-) m6A 3'UTR//exon       24209618
chr1:33476197-33476198(-) m6A 3'UTR//exon       24209618
chr1:33476286-33476287(-) m6A 3'UTR//exon       24981863
chr1:33477179-33477180(-) m6A exon//intron       24284625//27773535
chr1:33477258-33477259(-) m6A exon//intron       24284625//27773535
chr1:33477285-33477286(-) m6A exon//intron       24284625//27773535
chr1:33477298-33477299(-) m6A exon//intron       24284625//27773535
chr1:33477679-33477680(-) m6A 3'UTR//exon//intron       27773535
chr1:33478720-33478721(-) m6A 3'UTR//intron       25456834//24981863//28052920//27773535
chr1:33478800-33478801(-) m6A 3'UTR//CDS//intron       24284625//24981863//28052920//27773535
chr1:33478858-33478859(-) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//22575960
chr1:33478921-33478922(-) m6A 3'UTR//CDS       24981863//27773535
chr1:33478991-33478992(-) m6A 3'UTR//CDS       24981863//27773535//27773536
chr1:33480106-33480107(-) m6A exon//intron       27773536
chr1:33480113-33480114(-) m6A exon//intron       27773536
chr1:33480153-33480154(-) Y 3'UTR//CDS//exon       25219674//26075521
chr1:33480154-33480155(-) Y 3'UTR//CDS//exon       25219674
chr1:33485295-33485296(-) m6A 3'UTR//intron       27773536
chr1:33485327-33485328(-) m6A 3'UTR//intron       27773536
chr1:33490118-33490119(-) m6A 3'UTR//CDS//exon//intron       24284625//27371828
chr1:33490148-33490149(-) m6A 3'UTR//CDS//exon//intron       24284625//24981863//27371828
chr1:33497253-33497254(-) m6A CDS//exon//intron       24284625//24981863//27371828
chr1:33502341-33502342(-) m6A CDS//exon//intron       24284625//24981863//27371828
chr1:33502402-33502403(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//27773536
chr1:33502430-33502431(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828//27773536
chr1:33502440-33502441(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828//27773536
chr1:33502457-33502458(-) m6A 5'UTR//exon//intron       24284625//25456834//24981863//27371828//27773536
chr1:33502474-33502475(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate AK2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART10-3p
Interactor2: AK2

Evidence Support:


Prediction-Evidence PITA//Targetscan
Support Database VmiReg

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