Basic Information:

  VIRBase ID:  

VHID00323964

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART8-3p:  MIMAT0003418          MFAP3:  NM_001242336     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART8-3p	MFAP3
miRBase Accession/Entrez ID	MIMAT0003418	4238
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MFAP3	chr5:153422933(+) A-I      intronic chr5:153486137(+) A-I      intronic chr5:153533112(+) A-I      intronic chr5:153422909(+) A-I      intronic chr5:153533013(+) A-I      intronic chr5:153533026(+) A-I      intronic chr5:153488101(+) A-I      intronic chr5:153488145(+) A-I      intronic chr5:153422855(+) A-I      intronic chr5:153486131(+) A-I      intronic chr5:153488017(+) A-I      intronic chr5:153533002(+) A-I      intronic chr5:153486129(+) A-I      intronic chr5:153488035(+) A-I      intronic chr5:153533066(+) A-I      intronic chr5:153486249(+) A-I      intronic chr5:153486145(+) A-I      intronic chr5:153422926(+) A-I      intronic chr5:153422924(+) A-I      intronic chr5:153488034(+) A-I      intronic chr5:153488038(+) A-I      intronic chr5:153533075(+) A-I      intronic chr5:153524739(+) A-I      intronic chr5:153527079(+) A-I      intronic chr5:153435299(+) A-I      3'UTR chr5:153546445(+) A-I      intronic chr5:153528934(+) A-I      intronic chr5:153528516(+) A-I      intronic chr5:153533168(+) A-I      intronic chr5:153532555(+) A-I      intronic chr5:153533106(+) A-I      intronic chr5:153532339(+) A-I      intronic chr5:153527331(+) A-I      intronic chr5:153484072(+) A-I      intronic chr5:153527091(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MFAP3	chr5:153418520-153418521(+) m6A 5'UTR       24981863 chr5:153418606-153418607(+) m6A 5'UTR//intron       24981863 chr5:153429146-153429147(+) m6A 5'UTR//intron       24981863 chr5:153429259-153429260(+) m6A 5'UTR//exon//intron       24284625//24981863//22608085 chr5:153429358-153429359(+) m6A CDS//exon//intron       24284625//25456834//24981863//26404942//22575960//22608085 chr5:153429428-153429429(+) m6A CDS//exon//intron       24284625//25456834//24981863//26404942//22575960//22608085 chr5:153429480-153429481(+) m6A CDS//exon//intron       24284625//25456834//24981863//22575960//22608085 chr5:153429551-153429552(+) m6A CDS//exon//intron       24284625 chr5:153431463-153431464(+) m6A exon//intron       - chr5:153432512-153432513(+) m6A 5'UTR//CDS//exon//intron       24284625//24209618 chr5:153432620-153432621(+) m6A 5'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr5:153432721-153432722(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153432751-153432752(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153432768-153432769(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153432823-153432824(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153432856-153432857(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153432885-153432886(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153432923-153432924(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153433005-153433006(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153433104-153433105(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153433153-153433154(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153433259-153433260(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153433326-153433327(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr5:153433523-153433524(+) m6A 3'UTR//intron       24284625//24981863//22575960//22608085 chr5:153433545-153433546(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr5:153433614-153433615(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr5:153433733-153433734(+) m6A 3'UTR//intron       24284625//24981863//26404942//22608085 chr5:153433745-153433746(+) m6A 3'UTR//intron       24284625//24981863 chr5:153433829-153433830(+) m6A 3'UTR//intron       24981863 chr5:153434212-153434213(+) m6A 3'UTR//intron       24981863 chr5:153434521-153434522(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr5:153434578-153434579(+) m6A 3'UTR//intron       24284625//24981863//27773535//22608085 chr5:153434644-153434645(+) m6A intron       24284625//24209618//24981863//27773535//22608085 chr5:153434690-153434691(+) m6A intron       24284625//24209618//24981863//27773535//22608085 chr5:153434826-153434827(+) m6A intron       24284625//24209618//24981863//22608085 chr5:153434836-153434837(+) m6A intron       24284625//24209618//24981863//22608085 chr5:153434865-153434866(+) m6A intron       24284625//24981863//22608085 chr5:153570581-153570582(+) m6A intron       24209618 chr5:153599802-153599803(+) m6A exon       24981863 chr5:153599808-153599809(+) m6A exon       24981863 chr5:153599890-153599891(+) m6A exon       24209618//24981863 chr5:153599926-153599927(+) m6A exon       24209618//24981863 chr5:153599944-153599945(+) m6A exon       24209618//24981863 chr5:153599990-153599991(+) m6A exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MFAP3	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART8-3p
Interactor2: MFAP3

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg