Detail Information

Basic Information:


  VIRBase ID:  

VHID00323743

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART8-3p:           FUCA1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART8-3p FUCA1
miRBase
Accession/Entrez ID		 MIMAT0003418 2517
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - FUCA

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FUCA1
chr1:24172936(-) A-I      intronic
chr1:24188831(-) A-I      intronic
chr1:24187324(-) A-I      intronic
chr1:24176583(-) A-I      intronic
chr1:24172957(-) A-I      intronic
chr1:24172943(-) A-I      intronic
chr1:24172939(-) A-I      intronic
chr1:24172905(-) A-I      intronic
chr1:24188852(-) A-I      intronic
chr1:24188836(-) A-I      intronic
chr1:24188816(-) A-I      intronic
chr1:24188835(-) A-I      intronic
chr1:24188833(-) A-I      intronic
chr1:24188832(-) A-I      intronic
chr1:24176272(-) A-I      intronic
chr1:24176274(-) A-I      intronic
chr1:24176350(-) A-I      intronic
chr1:24176560(-) A-I      intronic
chr1:24176561(-) A-I      intronic
chr1:24176236(-) A-I      intronic
chr1:24176649(-) A-I      intronic
chr1:24176634(-) A-I      intronic
chr1:24176625(-) A-I      intronic
chr1:24176622(-) A-I      intronic
chr1:24176602(-) A-I      intronic
chr1:24176584(-) A-I      intronic
chr1:24176237(-) A-I      intronic
chr1:24176249(-) A-I      intronic
chr1:24173196(-) A-I      intronic
chr1:24172993(-) A-I      intronic
chr1:24172845(-) A-I      intronic
chr1:24177744(-) A-I      intronic
chr1:24191413(-) A-I      intronic
chr1:24191306(-) A-I      intronic
chr1:24185973(-) A-I      intronic
chr1:24173461(-) A-I      intronic
chr1:24174449(-) A-I      intronic
chr1:24174450(-) A-I      intronic
chr1:24185944(-) A-I      intronic
chr1:24185894(-) A-I      intronic
chr1:24185827(-) A-I      intronic
chr1:24185813(-) A-I      intronic
chr1:24185800(-) A-I      intronic
chr1:24185471(-) A-I      intronic
chr1:24184762(-) A-I      intronic
chr1:24184758(-) A-I      intronic
chr1:24184752(-) A-I      intronic
chr1:24183438(-) A-I      intronic
chr1:24177771(-) A-I      intronic
chr1:24177768(-) A-I      intronic
chr1:24177742(-) A-I      intronic
chr1:24177730(-) A-I      intronic
chr1:24177366(-) A-I      intronic
chr1:24176255(-) A-I      intronic
chr1:24175601(-) A-I      intronic
chr1:24175605(-) A-I      intronic
chr1:24175657(-) A-I      intronic
chr1:24176201(-) A-I      intronic
chr1:24174368(-) A-I      intronic
chr1:24175526(-) A-I      intronic
chr1:24187267(-) A-I      intronic
chr1:24184846(-) A-I      intronic
chr1:24175611(-) A-I      intronic
chr1:24172980(-) A-I      intronic
chr1:24191359(-) A-I      intronic
chr1:24185939(-) A-I      intronic
chr1:24178773(-) A-I      intronic
chr1:24177388(-) A-I      intronic
chr1:24176300(-) A-I      intronic
chr1:24185874(-) A-I      intronic
chr1:24185956(-) A-I      intronic
chr1:24177365(-) A-I      intronic
chr1:24185330(-) A-I      intronic
chr1:24185290(-) A-I      intronic
chr1:24176684(-) A-I      intronic
chr1:24173049(-) A-I      intronic
chr1:24184119(-) A-I      intronic
chr1:24177111(-) A-I      intronic
chr1:24184085(-) A-I      intronic
chr1:24172840(-) A-I      intronic
chr1:24178795(-) A-I      intronic
chr1:24172925(-) A-I      intronic
chr1:24191472(-) A-I      intronic
chr1:24176724(-) A-I      intronic
chr1:24185300(-) A-I      intronic
chr1:24176706(-) A-I      intronic
chr1:24187218(-) A-I      intronic
chr1:24175757(-) A-I      intronic
chr1:24190298(-) A-I      intronic
chr1:24190260(-) A-I      intronic
chr1:24185313(-) A-I      intronic
chr1:24177734(-) A-I      intronic
chr1:24174476(-) A-I      intronic
chr1:24172934(-) A-I      intronic
chr1:24184852(-) A-I      intronic
chr1:24186817(-) A-I      intronic
chr1:24185491(-) A-I      intronic
chr1:24173040(-) A-I      intronic
chr1:24187275(-) A-I      intronic
chr1:24186576(-) A-I      intronic
chr1:24190798(-) A-I      intronic
chr1:24175597(-) A-I      intronic
chr1:24185553(-) A-I      intronic
chr1:24187305(-) A-I      intronic
chr1:24184693(-) A-I      intronic
chr1:24177271(-) A-I      intronic
chr1:24187325(-) A-I      intronic
chr1:24190715(-) A-I      intronic
chr1:24175678(-) A-I      intronic
chr1:24185934(-) A-I      intronic
chr1:24177548(-) A-I      intronic
chr1:24178816(-) A-I      intronic
chr1:24172940(-) A-I      intronic
chr1:24187273(-) A-I      intronic
chr1:24191474(-) A-I      intronic
chr1:24187356(-) A-I      intronic
chr1:24185993(-) A-I      intronic
chr1:24187159(-) A-I      intronic
chr1:24185413(-) A-I      intronic
chr1:24190799(-) A-I      intronic
chr1:24185544(-) A-I      intronic
chr1:24190233(-) A-I      intronic
chr1:24190311(-) A-I      intronic
chr1:24190220(-) A-I      intronic
chr1:24177732(-) A-I      intronic
chr1:24190218(-) A-I      intronic
chr1:24177360(-) A-I      intronic
chr1:24188839(-) A-I      intronic
chr1:24186034(-) A-I      intronic
chr1:24178792(-) A-I      intronic
chr1:24177682(-) A-I      intronic
chr1:24177334(-) A-I      intronic
chr1:24190741(-) A-I      intronic
chr1:24186590(-) A-I      intronic
chr1:24187393(-) A-I      intronic
chr1:24177823(-) A-I      intronic
chr1:24172921(-) A-I      intronic
chr1:24187355(-) A-I      intronic
chr1:24187221(-) A-I      intronic
chr1:24190873(-) A-I      intronic
chr1:24175679(-) A-I      intronic
chr1:24190688(-) A-I      intronic
chr1:24186597(-) A-I      intronic
chr1:24184086(-) A-I      intronic
chr1:24191333(-) A-I      intronic
chr1:24187366(-) A-I      intronic
chr1:24173200(-) A-I      intronic
chr1:24175610(-) A-I      intronic
chr1:24173245(-) A-I      intronic
chr1:24177201(-) A-I      intronic
chr1:24190850(-) A-I      intronic
chr1:24172960(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FUCA1
chr1:24172980(-) A-G intron -    22484847
chr1:24174368(-) A-G intron -    22484847
chr1:24176724(-) A-G intron -    22484847
chr1:24177201(-) A-G intron -    22484847
chr1:24184119(-) A-G intron -    22484847
chr1:24184693(-) A-G intron -    22484847
chr1:24185939(-) A-G intron -    22484847
chr1:24185993(-) A-G intron -    22484847
chr1:24186034(-) A-G intron -    22484847
chr1:24187159(-) A-G intron -    22484847
chr1:24187273(-) A-G intron -    22484847
chr1:24187305(-) A-G intron -    22484847
chr1:24187325(-) A-G intron -    22484847
chr1:24190218(-) A-G intron -    22484847
chr1:24190220(-) A-G intron -    22484847
chr1:24190233(-) A-G intron -    22484847
chr1:24190298(-) A-G intron -    22484847
chr1:24190715(-) A-G intron -    22484847
chr1:24190798(-) A-G intron -    22484847
chr1:24190799(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FUCA1
chr1:24171966-24171967(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr1:24171979-24171980(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//22608085
chr1:24172035-24172036(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22608085
chr1:24172065-24172066(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22608085
chr1:24172117-24172118(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22608085
chr1:24172230-24172231(-) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr1:24194657-24194658(-) m6A CDS       27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FUCA1
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART8-3p
Interactor2: FUCA1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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