Detail Information

Basic Information:


  VIRBase ID:  

VHID00323324

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART8-5p:           BMPER:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART8-5p BMPER
miRBase
Accession/Entrez ID
MIMAT0003417 168667
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CRIM3//CV-2//CV2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BMPER
chr7:34160257(+) A-I      intronic
chr7:34063774(+) A-I      intronic
chr7:34063794(+) A-I      intronic
chr7:34063805(+) A-I      intronic
chr7:34063814(+) A-I      intronic
chr7:33994553(+) A-I      intronic
chr7:33994558(+) A-I      intronic
chr7:33994566(+) A-I      intronic
chr7:34003346(+) A-I      intronic
chr7:34003350(+) A-I      intronic
chr7:34151951(+) A-I      intronic
chr7:34063768(+) A-I      intronic
chr7:34160085(+) A-I      intronic
chr7:34063823(+) A-I      intronic
chr7:34160091(+) A-I      intronic
chr7:34151505(+) A-I      intronic
chr7:34063817(+) A-I      intronic
chr7:34003349(+) A-I      intronic
chr7:34063876(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BMPER
chr7:34118524-34118525(+) m6A CDS//intron       24981863
chr7:34118567-34118568(+) m6A CDS//intron       24981863
chr7:34118623-34118624(+) m6A CDS//intron       24981863
chr7:34118641-34118642(+) m6A CDS//intron       24981863
chr7:34125391-34125392(+) m6A CDS//exon       24981863
chr7:34125464-34125465(+) m6A CDS//exon       24981863//22608085
chr7:34125499-34125500(+) m6A CDS//exon       24981863//22608085
chr7:34125566-34125567(+) m6A CDS//exon       25456834//24981863
chr7:34125590-34125591(+) m6A CDS//exon       25456834//24981863
chr7:34125603-34125604(+) m6A CDS//exon       25456834//24981863
chr7:34192829-34192830(+) m6A CDS       24981863
chr7:34192905-34192906(+) m6A 3'UTR       24981863
chr7:34192954-34192955(+) m6A 3'UTR       24981863
chr7:34192984-34192985(+) m6A 3'UTR       24981863
chr7:34193035-34193036(+) m6A 3'UTR       24981863
chr7:34193055-34193056(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BMPER
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART8-5p
Interactor2: BMPER

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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