Basic Information:

  VIRBase ID:  

VHID00318928

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          SLC2A12:  NM_145176     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	SLC2A12
miRBase Accession/Entrez ID	MIMAT0003415	154091
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GLUT12//GLUT8

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC2A12	chr6:134361355(-) A-I      intronic chr6:134361345(-) A-I      intronic chr6:134361338(-) A-I      intronic chr6:134361319(-) A-I      intronic chr6:134361287(-) A-I      intronic chr6:134369595(-) A-I      intronic chr6:134369700(-) A-I      intronic chr6:134359572(-) A-I      intronic chr6:134359954(-) A-I      intronic chr6:134359939(-) A-I      intronic chr6:134359935(-) A-I      intronic chr6:134359747(-) A-I      intronic chr6:134359744(-) A-I      intronic chr6:134359583(-) A-I      intronic chr6:134359560(-) A-I      intronic chr6:134359628(-) A-I      intronic chr6:134359554(-) A-I      intronic chr6:134369478(-) A-I      intronic chr6:134340975(-) A-I      intronic chr6:134372337(-) A-I      intronic chr6:134369624(-) A-I      intronic chr6:134346958(-) A-I      intronic chr6:134346951(-) A-I      intronic chr6:134319803(-) A-I      intronic chr6:134361415(-) A-I      intronic chr6:134360129(-) A-I      intronic chr6:134358733(-) A-I      intronic chr6:134359701(-) A-I      intronic chr6:134330976(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC2A12	chr6:134311274-134311275(-) m6A 3'UTR       24981863 chr6:134311282-134311283(-) m6A 3'UTR       24981863 chr6:134312120-134312121(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr6:134312152-134312153(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr6:134312171-134312172(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr6:134312186-134312187(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr6:134312233-134312234(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr6:134312255-134312256(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr6:134312297-134312298(-) m6A CDS       24209618//25456834//22608085 chr6:134312367-134312368(-) m6A CDS       24209618//22608085 chr6:134312385-134312386(-) m6A CDS       24209618 chr6:134349607-134349608(-) m6A CDS       24209618//24981863//22608085 chr6:134349745-134349746(-) m6A CDS       24209618//25456834//24981863//27773535//22608085 chr6:134349775-134349776(-) m6A CDS       24209618//25456834//24981863//27773535//22608085 chr6:134349783-134349784(-) m6A CDS       24209618//25456834//24981863//27773535//22608085 chr6:134349850-134349851(-) m6A CDS       24209618//24981863//27773535//22608085 chr6:134349929-134349930(-) m6A CDS       24209618//24981863//22608085 chr6:134349946-134349947(-) m6A CDS       24209618//24981863//22608085 chr6:134350075-134350076(-) m6A CDS       24209618//24981863//22608085 chr6:134350116-134350117(-) m6A CDS       24209618//24981863//22608085 chr6:134350133-134350134(-) m6A CDS       24209618//24981863//22608085 chr6:134350144-134350145(-) m6A CDS       24209618//24981863//22608085 chr6:134350215-134350216(-) m6A CDS       24209618//24981863//27773535//22608085 chr6:134350278-134350279(-) m6A CDS       24209618//24981863//22608085 chr6:134350608-134350609(-) m6A CDS       24209618//24981863//22608085 chr6:134350640-134350641(-) m6A CDS       24209618//24981863//22608085 chr6:134350657-134350658(-) m6A CDS       24209618//24981863//22608085 chr6:134350754-134350755(-) m6A CDS       24209618//24981863//22608085 chr6:134350791-134350792(-) m6A CDS       24209618//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC2A12	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: SLC2A12

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg