Basic Information:

  VIRBase ID:  

VHID00318536

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          FAM136A:  NM_001329752     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	FAM136A
miRBase Accession/Entrez ID	MIMAT0003415	84908
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FAM136A	chr2:70525321(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FAM136A	chr2:70523483-70523484(-) m6A 3'UTR//exon       24981863 chr2:70523499-70523500(-) m6A 3'UTR//exon       24981863 chr2:70523565-70523566(-) m6A 3'UTR//exon       24981863//22608085 chr2:70523640-70523641(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr2:70523724-70523725(-) m6A 3'UTR//exon       24981863//22608085 chr2:70523735-70523736(-) m6A 3'UTR//exon       24981863//22608085 chr2:70524104-70524105(-) m6A 3'UTR//exon       24284625//27773535 chr2:70524276-70524277(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr2:70524514-70524515(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr2:70527651-70527652(-) m6A exon//intron       24981863 chr2:70528074-70528075(-) m6A 3'UTR//CDS//exon       27773536//22575960 chr2:70528147-70528148(-) m6A exon//intron       25456834//27773536 chr2:70528372-70528373(-) m6A exon//intron       - chr2:70528400-70528401(-) m6A exon//intron       - chr2:70528445-70528446(-) m6A exon//intron       - chr2:70528676-70528677(-) m6A CDS//exon//intron       27371828//27773536 chr2:70528691-70528692(-) m6A CDS//exon//intron       27371828//27773536 chr2:70528950-70528951(-) m6A CDS//intron       27773536 chr2:70529030-70529031(-) m6A CDS//intron       25456834//27773536 chr2:70529036-70529037(-) m6A CDS//intron       25456834//27773536 chr2:70529072-70529073(-) m6A CDS//exon       24209618//25456834//24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FAM136A	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: FAM136A

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg