Detail Information

Basic Information:


  VIRBase ID:  

VHID00318142

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:           PRX:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART6-3p PRX
miRBase
Accession/Entrez ID		 MIMAT0003415 57716
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CMT4F

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRX
chr19:40907843(-) A-I      intronic
chr19:40907893(-) A-I      intronic
chr19:40908929(-) A-I      intronic
chr19:40908965(-) A-I      intronic
chr19:40907793(-) A-I      intronic
chr19:40906328(-) A-I      intronic
chr19:40906343(-) A-I      intronic
chr19:40906351(-) A-I      intronic
chr19:40907799(-) A-I      intronic
chr19:40907825(-) A-I      intronic
chr19:40907836(-) A-I      intronic
chr19:40907840(-) A-I      intronic
chr19:40907785(-) A-I      intronic
chr19:40908217(-) A-I      intronic
chr19:40907801(-) A-I      intronic
chr19:40907798(-) A-I      intronic
chr19:40907789(-) A-I      intronic
chr19:40907338(-) A-I      intronic
chr19:40907732(-) A-I      intronic
chr19:40907710(-) A-I      intronic
chr19:40907678(-) A-I      intronic
chr19:40907344(-) A-I      intronic
chr19:40907865(-) A-I      intronic
chr19:40908149(-) A-I      intronic
chr19:40914963(-) A-I      intronic
chr19:40905740(-) A-I      intronic
chr19:40905892(-) A-I      intronic
chr19:40914654(-) A-I      intronic
chr19:40905975(-) A-I      intronic
chr19:40906065(-) A-I      intronic
chr19:40912743(-) A-I      intronic
chr19:40909038(-) A-I      intronic
chr19:40908994(-) A-I      intronic
chr19:40908977(-) A-I      intronic
chr19:40908497(-) A-I      intronic
chr19:40906083(-) A-I      intronic
chr19:40908235(-) A-I      intronic
chr19:40905966(-) A-I      intronic
chr19:40908489(-) A-I      intronic
chr19:40908148(-) A-I      intronic
chr19:40906092(-) A-I      intronic
chr19:40907292(-) A-I      intronic
chr19:40907316(-) A-I      intronic
chr19:40907337(-) A-I      intronic
chr19:40907809(-) A-I      intronic
chr19:40908139(-) A-I      intronic
chr19:40908078(-) A-I      intronic
chr19:40907874(-) A-I      intronic
chr19:40907747(-) A-I      intronic
chr19:40909074(-) A-I      intronic
chr19:40908953(-) A-I      intronic
chr19:40907268(-) A-I      intronic
chr19:40914938(-) A-I      intronic
chr19:40906022(-) A-I      intronic
chr19:40906054(-) A-I      intronic
chr19:40914937(-) A-I      intronic
chr19:40906014(-) A-I      intronic
chr19:40908955(-) A-I      intronic
chr19:40913384(-) A-I      intronic
chr19:40906387(-) A-I      intronic
chr19:40912789(-) A-I      intronic
chr19:40908897(-) A-I      intronic
chr19:40905958(-) A-I      intronic
chr19:40905919(-) A-I      intronic
chr19:40912748(-) A-I      intronic
chr19:40906565(-) A-I      intronic
chr19:40907230(-) A-I      intronic
chr19:40907888(-) A-I      intronic
chr19:40907282(-) A-I      intronic
chr19:40907839(-) A-I      intronic
chr19:40905887(-) A-I      intronic
chr19:40906180(-) A-I      intronic
chr19:40907320(-) A-I      intronic
chr19:40906001(-) A-I      intronic
chr19:40907722(-) A-I      intronic
chr19:40906377(-) A-I      intronic
chr19:40907275(-) A-I      intronic
chr19:40908914(-) A-I      intronic
chr19:40907703(-) A-I      intronic
chr19:40906018(-) A-I      intronic
chr19:40905942(-) A-I      intronic
chr19:40905898(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PRX
chr19:40906017(-) C-G intron -    22484847
chr19:40906054(-) A-G intron -    22484847
chr19:40907677(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRX
chr19:40899978-40899979(-) m6A 3'UTR//CDS       24209618//27773536
chr19:40900268-40900269(-) m6A 3'UTR//CDS       24209618
chr19:40900355-40900356(-) m6A 3'UTR//CDS       24209618
chr19:40901147-40901148(-) m6A 3'UTR//CDS       25456834
chr19:40901163-40901164(-) m6A 3'UTR//CDS       25456834
chr19:40901447-40901448(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828
chr19:40901491-40901492(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863
chr19:40901888-40901889(-) m6A 3'UTR//CDS       25456834//24981863//27371828
chr19:40902074-40902075(-) m6A 3'UTR//CDS       24284625//22608085
chr19:40902182-40902183(-) m6A 3'UTR//CDS       22608085
chr19:40902260-40902261(-) m6A 3'UTR//CDS       22608085
chr19:40902338-40902339(-) m6A 3'UTR//CDS       -
chr19:40902353-40902354(-) m6A 3'UTR//CDS       -
chr19:40902461-40902462(-) m6A 3'UTR//CDS       -
chr19:40902476-40902477(-) m6A 3'UTR//CDS       -
chr19:40902593-40902594(-) m6A 3'UTR//CDS       -
chr19:40902749-40902750(-) m6A 3'UTR//CDS       -
chr19:40902827-40902828(-) m6A 3'UTR//CDS       27371828
chr19:40902941-40902942(-) m6A 3'UTR//CDS       24284625//27371828
chr19:40903088-40903089(-) m6A 3'UTR//CDS       24284625//25456834
chr19:40903251-40903252(-) m6A 3'UTR//CDS       24284625//24209618//25456834//27371828//27773536//22608085
chr19:40903318-40903319(-) m6A 3'UTR//CDS       24284625//25456834//27371828//27773536//22608085
chr19:40903875-40903876(-) m6A 3'UTR//CDS       -
chr19:40904194-40904195(-) m6A 3'UTR//intron       25456834
chr19:40904576-40904577(-) m6A CDS       27371828
chr19:40904596-40904597(-) m6A CDS       27371828
chr19:40914153-40914154(-) m6A 5'UTR       25456834
chr19:40914281-40914282(-) m6A 5'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PRX
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART6-3p
Interactor2: PRX

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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