Detail Information

Basic Information:


  VIRBase ID:  

VHID00318048

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:           ANKMY2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART6-3p ANKMY2
miRBase
Accession/Entrez ID		 MIMAT0003415 57037
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - ZMYND20

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ANKMY2
chr7:16658442(-) A-I      intronic
chr7:16656939(-) A-I      intronic
chr7:16656878(-) A-I      intronic
chr7:16656874(-) A-I      intronic
chr7:16656844(-) A-I      intronic
chr7:16656843(-) A-I      intronic
chr7:16656778(-) A-I      intronic
chr7:16680268(-) A-I      intronic
chr7:16679371(-) A-I      intronic
chr7:16679355(-) A-I      intronic
chr7:16647111(-) A-I      intronic
chr7:16647125(-) A-I      intronic
chr7:16665884(-) A-I      intronic
chr7:16665856(-) A-I      intronic
chr7:16657818(-) A-I      intronic
chr7:16657802(-) A-I      intronic
chr7:16657347(-) A-I      intronic
chr7:16647147(-) A-I      intronic
chr7:16647130(-) A-I      intronic
chr7:16646047(-) A-I      intronic
chr7:16646010(-) A-I      intronic
chr7:16645907(-) A-I      intronic
chr7:16645890(-) A-I      intronic
chr7:16645706(-) A-I      intronic
chr7:16645396(-) A-I      intronic
chr7:16645392(-) A-I      intronic
chr7:16645247(-) A-I      intronic
chr7:16645199(-) A-I      intronic
chr7:16645191(-) A-I      intronic
chr7:16645190(-) A-I      intronic
chr7:16656731(-) A-I      intronic
chr7:16656732(-) A-I      intronic
chr7:16656733(-) A-I      intronic
chr7:16656742(-) A-I      intronic
chr7:16656752(-) A-I      intronic
chr7:16656753(-) A-I      intronic
chr7:16656759(-) A-I      intronic
chr7:16656760(-) A-I      intronic
chr7:16656779(-) A-I      intronic
chr7:16656797(-) A-I      intronic
chr7:16656805(-) A-I      intronic
chr7:16656846(-) A-I      intronic
chr7:16656852(-) A-I      intronic
chr7:16656860(-) A-I      intronic
chr7:16656868(-) A-I      intronic
chr7:16656869(-) A-I      intronic
chr7:16658391(-) A-I      intronic
chr7:16658395(-) A-I      intronic
chr7:16658396(-) A-I      intronic
chr7:16680796(-) A-I      intronic
chr7:16671378(-) A-I      intronic
chr7:16657334(-) A-I      intronic
chr7:16665766(-) A-I      intronic
chr7:16647071(-) A-I      intronic
chr7:16653439(-) A-I      intronic
chr7:16645845(-) A-I      intronic
chr7:16680782(-) A-I      intronic
chr7:16645872(-) A-I      intronic
chr7:16680772(-) A-I      intronic
chr7:16645932(-) A-I      intronic
chr7:16646048(-) A-I      intronic
chr7:16645954(-) A-I      intronic
chr7:16645972(-) A-I      intronic
chr7:16645581(-) A-I      intronic
chr7:16680270(-) A-I      intronic
chr7:16645873(-) A-I      intronic
chr7:16646012(-) A-I      intronic
chr7:16657896(-) A-I      intronic
chr7:16647110(-) A-I      intronic
chr7:16657346(-) A-I      intronic
chr7:16645580(-) A-I      intronic
chr7:16657356(-) A-I      intronic
chr7:16679283(-) A-I      intronic
chr7:16665814(-) A-I      intronic
chr7:16679237(-) A-I      intronic
chr7:16657374(-) A-I      intronic
chr7:16646032(-) A-I      intronic
chr7:16646007(-) A-I      intronic
chr7:16645489(-) A-I      intronic
chr7:16679285(-) A-I      intronic
chr7:16645715(-) A-I      intronic
chr7:16657885(-) A-I      intronic
chr7:16645790(-) A-I      intronic
chr7:16645799(-) A-I      intronic
chr7:16680204(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ANKMY2
chr7:16656760(-) A-I intron -    21960545
chr7:16656778(-) A-I intron -    21960545
chr7:16656942(-) A-I intron -    21960545
chr7:16658382(-) A-I intron -    21960545
chr7:16658441(-) A-I intron -    21960545

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ANKMY2
chr7:16639403-16639404(-) m6A 3'UTR       27773535
chr7:16639491-16639492(-) m6A 3'UTR       27773535
chr7:16639553-16639554(-) m6A 3'UTR       27773535
chr7:16639660-16639661(-) m6A 3'UTR       24981863//27773535
chr7:16639683-16639684(-) m6A 3'UTR       24981863//27773535
chr7:16639739-16639740(-) m6A 3'UTR       24981863//27773535
chr7:16639812-16639813(-) m6A 3'UTR       24284625//24981863//27773535
chr7:16639821-16639822(-) m6A 3'UTR       24981863//27773535
chr7:16639871-16639872(-) m6A 3'UTR       24981863//27773535//22608085
chr7:16640038-16640039(-) m6A 3'UTR       24981863//27773535
chr7:16640047-16640048(-) m6A 3'UTR       24981863//27773535
chr7:16640055-16640056(-) m6A 3'UTR       24981863//27773535
chr7:16640331-16640332(-) m6A 3'UTR       -
chr7:16640562-16640563(-) m6A 3'UTR//CDS       24981863
chr7:16642006-16642007(-) m6A 3'UTR//CDS       24981863
chr7:16642017-16642018(-) m6A 3'UTR//CDS       24981863
chr7:16642060-16642061(-) m6A 3'UTR//CDS       24981863
chr7:16642103-16642104(-) m6A 3'UTR//CDS       24981863
chr7:16650281-16650282(-) m6A CDS       27773535
chr7:16685398-16685399(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ANKMY2
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART6-3p
Interactor2: ANKMY2

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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