Basic Information:

  VIRBase ID:  

VHID00317606

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          HSPB8:  NM_014365     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	HSPB8
miRBase Accession/Entrez ID	MIMAT0003415	26353
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CMT2L//DHMN2//E2IG1//H11//HMN2//HMN2A//HSP22

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HSPB8	chr12:119616969(+) A-I      5'UTR chr12:119630304(+) A-I      intronic chr12:119630313(+) A-I      intronic chr12:119630207(+) A-I      intronic chr12:119625234(+) A-I      intronic chr12:119625301(+) A-I      intronic chr12:119630298(+) A-I      intronic chr12:119630212(+) A-I      intronic chr12:119630317(+) A-I      intronic chr12:119630244(+) A-I      intronic chr12:119630250(+) A-I      intronic chr12:119630289(+) A-I      intronic chr12:119625277(+) A-I      intronic chr12:119630274(+) A-I      intronic chr12:119630283(+) A-I      intronic chr12:119630284(+) A-I      intronic chr12:119623099(+) A-I      intronic chr12:119623089(+) A-I      intronic chr12:119630436(+) A-I      intronic chr12:119630411(+) A-I      intronic chr12:119630340(+) A-I      intronic chr12:119623093(+) A-I      intronic chr12:119625299(+) A-I      intronic chr12:119630339(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HSPB8	chr12:119616566-119616567(+) m6A 5'UTR       24981863 chr12:119616678-119616679(+) m6A 5'UTR       24981863 chr12:119616740-119616741(+) m1A 5'UTR       26863196 chr12:119616793-119616794(+) m6A 5'UTR       24284625//25456834//24981863 chr12:119616884-119616885(+) m6A 5'UTR       24284625//25456834 chr12:119616936-119616937(+) m6A 5'UTR       24284625//25456834 chr12:119616951-119616952(+) m6A 5'UTR       24284625//25456834 chr12:119617172-119617173(+) m6A CDS       24284625//25456834//24981863//22575960 chr12:119617184-119617185(+) m6A CDS       24284625//25456834//24981863//22575960 chr12:119617229-119617230(+) m6A CDS       24284625//25456834//24981863//22575960 chr12:119617375-119617376(+) m6A CDS       22575960 chr12:119632763-119632764(+) m1A intron       26863196 chr12:119632829-119632830(+) m6A intron       24981863 chr12:119632871-119632872(+) m6A intron       24981863 chr12:119632907-119632908(+) m6A intron       24981863 chr12:119632927-119632928(+) m6A intron       24981863 chr12:119633050-119633051(+) m6A intron       24209618//24981863 chr12:119633096-119633097(+) m6A intron       24209618//24981863 chr12:119633121-119633122(+) m1A intron       26863196

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HSPB8	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: HSPB8

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg