Basic Information:

  VIRBase ID:  

VHID00317386

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          ABLIM3:  NM_001345858     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	ABLIM3
miRBase Accession/Entrez ID	MIMAT0003415	22885
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HMFN1661

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABLIM3	chr5:148572138(+) A-I      intronic chr5:148570198(+) A-I      intronic chr5:148632760(+) A-I      intronic chr5:148632762(+) A-I      intronic chr5:148632766(+) A-I      intronic chr5:148632786(+) A-I      intronic chr5:148632815(+) A-I      intronic chr5:148632816(+) A-I      intronic chr5:148632817(+) A-I      intronic chr5:148632855(+) A-I      intronic chr5:148632830(+) A-I      intronic chr5:148632814(+) A-I      intronic chr5:148632802(+) A-I      intronic chr5:148634784(+) A-I      intronic chr5:148634796(+) A-I      intronic chr5:148634696(+) A-I      intronic chr5:148634826(+) A-I      intronic chr5:148634667(+) A-I      intronic chr5:148634717(+) A-I      intronic chr5:148634708(+) A-I      intronic chr5:148634678(+) A-I      intronic chr5:148632943(+) A-I      intronic chr5:148632929(+) A-I      intronic chr5:148634668(+) A-I      intronic chr5:148632901(+) A-I      intronic chr5:148634694(+) A-I      intronic chr5:148632759(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ABLIM3	chr5:148596531(+) A-I exon CDS    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABLIM3	chr5:148521402-148521403(+) m6A 5'UTR//intron       24981863 chr5:148521494-148521495(+) m6A 5'UTR//intron       - chr5:148521505-148521506(+) m6A 5'UTR//intron       - chr5:148521551-148521552(+) m6A 5'UTR//intron       - chr5:148632383-148632384(+) m6A 3'UTR//CDS//exon       24981863 chr5:148632388-148632389(+) m6A 3'UTR//CDS//exon       24981863 chr5:148637939-148637940(+) m6A 3'UTR//CDS//exon//intron       24981863 chr5:148638059-148638060(+) m6A 3'UTR//exon//intron       24981863 chr5:148639222-148639223(+) m6A 3'UTR       - chr5:148639259-148639260(+) m6A 3'UTR       24209618 chr5:148639324-148639325(+) m6A 3'UTR       24209618//24981863//27773535 chr5:148639414-148639415(+) m6A 3'UTR       24284625//24209618//24981863//27773535 chr5:148639429-148639430(+) m6A 3'UTR       24284625//24209618//24981863//27773535 chr5:148639526-148639527(+) m6A 3'UTR       24209618//24981863//27773535 chr5:148639581-148639582(+) m6A 3'UTR       24209618//24981863

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: ABLIM3

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg