Basic Information:

  VIRBase ID:  

VHID00317374

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          PPM1E:  NR_048561     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	PPM1E
miRBase Accession/Entrez ID	MIMAT0003415	22843
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	caMKN//CaMKP-N//POPX1//PP2CH

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PPM1E	chr17:56842097(+) A-I      intronic chr17:56945512(+) A-I      intronic chr17:56945513(+) A-I      intronic chr17:56945535(+) A-I      intronic chr17:56836595(+) A-I      intronic chr17:56836558(+) A-I      intronic chr17:56945539(+) A-I      intronic chr17:56945548(+) A-I      intronic chr17:56945538(+) A-I      intronic chr17:57032060(+) A-I      intronic chr17:57032061(+) A-I      intronic chr17:56872349(+) A-I      intronic chr17:56836601(+) A-I      intronic chr17:57032077(+) A-I      intronic chr17:56945552(+) A-I      intronic chr17:57032074(+) A-I      intronic chr17:56945508(+) A-I      intronic chr17:56945482(+) A-I      intronic chr17:57032068(+) A-I      intronic chr17:56849556(+) A-I      intronic chr17:56848878(+) A-I      intronic chr17:56848842(+) A-I      intronic chr17:56904689(+) A-I      intronic chr17:56904767(+) A-I      intronic chr17:56907293(+) A-I      intronic chr17:56907308(+) A-I      intronic chr17:56907798(+) A-I      intronic chr17:56912452(+) A-I      intronic chr17:56912603(+) A-I      intronic chr17:56912604(+) A-I      intronic chr17:56914287(+) A-I      intronic chr17:56920393(+) A-I      intronic chr17:56920419(+) A-I      intronic chr17:56920931(+) A-I      intronic chr17:56942918(+) A-I      intronic chr17:56848838(+) A-I      intronic chr17:56848824(+) A-I      intronic chr17:56964589(+) A-I      intronic chr17:56848820(+) A-I      intronic chr17:56959345(+) A-I      intronic chr17:56958046(+) A-I      intronic chr17:56958016(+) A-I      intronic chr17:56958008(+) A-I      intronic chr17:56847830(+) A-I      intronic chr17:56847811(+) A-I      intronic chr17:56854444(+) A-I      intronic chr17:56982192(+) A-I      intronic chr17:56975506(+) A-I      intronic chr17:56968357(+) A-I      intronic chr17:56964728(+) A-I      intronic chr17:56854368(+) A-I      intronic chr17:56849766(+) A-I      intronic chr17:56849564(+) A-I      intronic chr17:56849565(+) A-I      intronic chr17:56854361(+) A-I      intronic chr17:56964612(+) A-I      intronic chr17:56847281(+) A-I      intronic chr17:56847110(+) A-I      intronic chr17:56943047(+) A-I      intronic chr17:56943044(+) A-I      intronic chr17:56835791(+) A-I      intronic chr17:56849710(+) A-I      intronic chr17:56849723(+) A-I      intronic chr17:56854344(+) A-I      intronic chr17:56849696(+) A-I      intronic chr17:56849729(+) A-I      intronic chr17:56854338(+) A-I      intronic chr17:56886580(+) A-I      intronic chr17:56897126(+) A-I      intronic chr17:56902675(+) A-I      intronic chr17:56904555(+) A-I      intronic chr17:56904625(+) A-I      intronic chr17:56904660(+) A-I      intronic chr17:56886496(+) A-I      intronic chr17:56873615(+) A-I      intronic chr17:56999780(+) A-I      intronic chr17:57012141(+) A-I      intronic chr17:57012168(+) A-I      intronic chr17:57018255(+) A-I      intronic chr17:57018257(+) A-I      intronic chr17:57023881(+) A-I      intronic chr17:57024500(+) A-I      intronic chr17:57024781(+) A-I      intronic chr17:57024787(+) A-I      intronic chr17:57024795(+) A-I      intronic chr17:57024803(+) A-I      intronic chr17:57032681(+) A-I      intronic chr17:57032691(+) A-I      intronic chr17:56873464(+) A-I      intronic chr17:56873457(+) A-I      intronic chr17:56871381(+) A-I      intronic chr17:56861090(+) A-I      intronic chr17:56859013(+) A-I      intronic chr17:56904664(+) A-I      intronic chr17:56856682(+) A-I      intronic chr17:56854448(+) A-I      intronic chr17:56964590(+) A-I      intronic chr17:56846929(+) A-I      intronic chr17:56897278(+) A-I      intronic chr17:56921078(+) A-I      intronic chr17:56896624(+) A-I      intronic chr17:56931174(+) A-I      intronic chr17:56873668(+) A-I      intronic chr17:56846918(+) A-I      intronic chr17:56855317(+) A-I      intronic chr17:56942246(+) A-I      intronic chr17:56845688(+) A-I      intronic chr17:56903140(+) A-I      intronic chr17:57000892(+) A-I      intronic chr17:57005513(+) A-I      intronic chr17:56876665(+) A-I      intronic chr17:57028924(+) A-I      intronic chr17:56998931(+) A-I      intronic chr17:56965905(+) A-I      intronic chr17:56865609(+) A-I      intronic chr17:56847793(+) A-I      intronic chr17:56853545(+) A-I      intronic chr17:56896745(+) A-I      intronic chr17:57032100(+) A-I      intronic chr17:57030164(+) A-I      intronic chr17:57045265(+) A-I      intronic chr17:57054548(+) A-I      intronic chr17:56973274(+) A-I      intronic chr17:56873658(+) A-I      intronic chr17:56889083(+) A-I      intronic chr17:56977323(+) A-I      intronic chr17:56889132(+) A-I      intronic chr17:56986751(+) A-I      intronic chr17:56854476(+) A-I      intronic chr17:56969677(+) A-I      intronic chr17:56942989(+) A-I      intronic chr17:57027713(+) A-I      intronic chr17:56889554(+) A-I      intronic chr17:57001851(+) A-I      intronic chr17:56859034(+) A-I      intronic chr17:56890015(+) A-I      intronic chr17:56894269(+) A-I      intronic chr17:56915039(+) A-I      intronic chr17:56948904(+) A-I      intronic chr17:56968395(+) A-I      intronic chr17:56876252(+) A-I      intronic chr17:56920607(+) A-I      intronic chr17:56920022(+) A-I      intronic chr17:56872527(+) A-I      intronic chr17:56872997(+) A-I      intronic chr17:56855968(+) A-I      intronic chr17:56908638(+) A-I      intronic chr17:56852404(+) A-I      intronic chr17:56856662(+) A-I      intronic chr17:57014402(+) A-I      intronic chr17:56973697(+) A-I      intronic chr17:56920469(+) A-I      intronic chr17:56903536(+) A-I      intronic chr17:57030297(+) A-I      intronic chr17:57035665(+) A-I      intronic chr17:56904638(+) A-I      intronic chr17:56859179(+) A-I      intronic chr17:56993867(+) A-I      intronic chr17:56968432(+) A-I      intronic chr17:56865595(+) A-I      intronic chr17:57000179(+) A-I      intronic chr17:57035410(+) A-I      intronic chr17:57035701(+) A-I      intronic chr17:56897287(+) A-I      intronic chr17:57032125(+) A-I      intronic chr17:56855562(+) A-I      intronic chr17:56903583(+) A-I      intronic chr17:56999714(+) A-I      intronic chr17:56845669(+) A-I      intronic chr17:56969811(+) A-I      intronic chr17:56839744(+) A-I      intronic chr17:56903464(+) A-I      intronic chr17:56845581(+) A-I      intronic chr17:56836380(+) A-I      intronic chr17:57055925(+) A-I      intronic chr17:57012465(+) A-I      intronic chr17:56903110(+) A-I      intronic chr17:56951226(+) A-I      intronic chr17:56859083(+) A-I      intronic chr17:56889518(+) A-I      intronic chr17:56871713(+) A-I      intronic chr17:56913991(+) A-I      intronic chr17:56955628(+) A-I      intronic chr17:56975294(+) A-I      intronic chr17:57032638(+) A-I      intronic chr17:56857754(+) A-I      intronic chr17:56853541(+) A-I      intronic chr17:56872488(+) A-I      intronic chr17:56920813(+) A-I      intronic chr17:56912938(+) A-I      intronic chr17:56913965(+) A-I      intronic chr17:56894286(+) A-I      intronic chr17:56965890(+) A-I      intronic chr17:56914488(+) A-I      intronic chr17:57035711(+) A-I      intronic chr17:56872826(+) A-I      intronic chr17:56942980(+) A-I      intronic chr17:56948636(+) A-I      intronic chr17:56903537(+) A-I      intronic chr17:56998767(+) A-I      intronic chr17:56914482(+) A-I      intronic chr17:57045769(+) A-I      intronic chr17:57043621(+) A-I      intronic chr17:56853567(+) A-I      intronic chr17:56907941(+) A-I      intronic chr17:57032124(+) A-I      intronic chr17:56872984(+) A-I      intronic chr17:57015050(+) A-I      intronic chr17:56977330(+) A-I      intronic chr17:57030287(+) A-I      intronic chr17:56923116(+) A-I      intronic chr17:56969397(+) A-I      intronic chr17:56971314(+) A-I      intronic chr17:56872350(+) A-I      intronic chr17:57008514(+) A-I      intronic chr17:56956200(+) A-I      intronic chr17:56858641(+) A-I      intronic chr17:57015094(+) A-I      intronic chr17:56914550(+) A-I      intronic chr17:57016250(+) A-I      intronic chr17:56861125(+) A-I      intronic chr17:56853500(+) A-I      intronic chr17:56907461(+) A-I      intronic chr17:56854411(+) A-I      intronic chr17:56861108(+) A-I      intronic chr17:56889534(+) A-I      intronic chr17:56845183(+) A-I      intronic chr17:56857734(+) A-I      intronic chr17:56912444(+) A-I      intronic chr17:57031366(+) A-I      intronic chr17:56865541(+) A-I      intronic chr17:56846811(+) A-I      intronic chr17:56919425(+) A-I      intronic chr17:57005234(+) A-I      intronic chr17:56938158(+) A-I      intronic chr17:56942218(+) A-I      intronic chr17:56975269(+) A-I      intronic chr17:56942254(+) A-I      intronic chr17:56873840(+) A-I      intronic chr17:56916603(+) A-I      intronic chr17:56842797(+) A-I      intronic chr17:56955622(+) A-I      intronic chr17:56862871(+) A-I      intronic chr17:56854345(+) A-I      intronic chr17:56915133(+) A-I      intronic chr17:56845709(+) A-I      intronic chr17:56872808(+) A-I      intronic chr17:56851268(+) A-I      intronic chr17:56907808(+) A-I      intronic chr17:56872882(+) A-I      intronic chr17:57054551(+) A-I      intronic chr17:56907303(+) A-I      intronic chr17:56956173(+) A-I      intronic chr17:57015090(+) A-I      intronic chr17:56876295(+) A-I      intronic chr17:56903503(+) A-I      intronic chr17:56858676(+) A-I      intronic chr17:56852394(+) A-I      intronic chr17:56916575(+) A-I      intronic chr17:57011280(+) A-I      intronic chr17:56853504(+) A-I      intronic chr17:56873905(+) A-I      intronic chr17:56969795(+) A-I      intronic chr17:57000525(+) A-I      intronic chr17:56839611(+) A-I      intronic chr17:56902067(+) A-I      intronic chr17:56839604(+) A-I      intronic chr17:56998789(+) A-I      intronic chr17:56847758(+) A-I      intronic chr17:56847212(+) A-I      intronic chr17:57055307(+) A-I      intronic chr17:56839605(+) A-I      intronic chr17:56969222(+) A-I      intronic chr17:56875729(+) A-I      intronic chr17:56969753(+) A-I      intronic chr17:56855992(+) A-I      intronic chr17:56902998(+) A-I      intronic chr17:56876664(+) A-I      intronic chr17:56872918(+) A-I      intronic chr17:56889161(+) A-I      intronic chr17:56855352(+) A-I      intronic chr17:56865516(+) A-I      intronic chr17:56969823(+) A-I      intronic chr17:56945629(+) A-I      intronic chr17:57032678(+) A-I      intronic chr17:56958699(+) A-I      intronic chr17:56854506(+) A-I      intronic chr17:56949056(+) A-I      intronic chr17:56921096(+) A-I      intronic chr17:56920615(+) A-I      intronic chr17:56912520(+) A-I      intronic chr17:56857714(+) A-I      intronic chr17:56912571(+) A-I      intronic chr17:56839682(+) A-I      intronic chr17:56999216(+) A-I      intronic chr17:56942049(+) A-I      intronic chr17:56956187(+) A-I      intronic chr17:56854453(+) A-I      intronic chr17:56873570(+) A-I      intronic chr17:57028782(+) A-I      intronic chr17:57032057(+) A-I      intronic chr17:56959305(+) A-I      intronic chr17:56971175(+) A-I      intronic chr17:56984540(+) A-I      intronic chr17:56904579(+) A-I      intronic chr17:57045665(+) A-I      intronic chr17:56836252(+) A-I      intronic chr17:56916606(+) A-I      intronic chr17:56920613(+) A-I      intronic chr17:56920758(+) A-I      intronic chr17:56842160(+) A-I      intronic chr17:56958770(+) A-I      intronic chr17:57055365(+) A-I      intronic chr17:56913955(+) A-I      intronic chr17:56956141(+) A-I      intronic chr17:57000742(+) A-I      intronic chr17:56907478(+) A-I      intronic chr17:57045725(+) A-I      intronic chr17:56914497(+) A-I      intronic chr17:56969791(+) A-I      intronic chr17:57028785(+) A-I      intronic chr17:56993864(+) A-I      intronic chr17:56923066(+) A-I      intronic chr17:56903128(+) A-I      intronic chr17:56873620(+) A-I      intronic chr17:56969703(+) A-I      intronic chr17:57023872(+) A-I      intronic chr17:56874317(+) A-I      intronic chr17:56856768(+) A-I      intronic chr17:56861169(+) A-I      intronic chr17:56993880(+) A-I      intronic chr17:56985631(+) A-I      intronic chr17:56865592(+) A-I      intronic chr17:56856743(+) A-I      intronic chr17:56845156(+) A-I      intronic chr17:56873894(+) A-I      intronic chr17:56859053(+) A-I      intronic chr17:57016423(+) A-I      intronic chr17:56856617(+) A-I      intronic chr17:56839631(+) A-I      intronic chr17:56945544(+) A-I      intronic chr17:57005558(+) A-I      intronic chr17:56882730(+) A-I      intronic chr17:56942957(+) A-I      intronic chr17:56839681(+) A-I      intronic chr17:56849738(+) A-I      intronic chr17:57031367(+) A-I      intronic chr17:56862086(+) A-I      intronic chr17:57030161(+) A-I      intronic chr17:56916602(+) A-I      intronic chr17:56946452(+) A-I      intronic chr17:56872835(+) A-I      intronic chr17:56968388(+) A-I      intronic chr17:56865621(+) A-I      intronic chr17:57014403(+) A-I      intronic chr17:57007507(+) A-I      intronic chr17:57004699(+) A-I      intronic chr17:56939240(+) A-I      intronic chr17:56872881(+) A-I      intronic chr17:56959071(+) A-I      intronic chr17:56848906(+) A-I      intronic chr17:56948997(+) A-I      intronic chr17:56849767(+) A-I      intronic chr17:56853590(+) A-I      intronic chr17:56874344(+) A-I      intronic chr17:56865105(+) A-I      intronic chr17:56975275(+) A-I      intronic chr17:57001555(+) A-I      intronic chr17:56859092(+) A-I      intronic chr17:57038927(+) A-I      intronic chr17:56889136(+) A-I      intronic chr17:56949106(+) A-I      intronic chr17:56855900(+) A-I      intronic chr17:56969827(+) A-I      intronic chr17:56853021(+) A-I      intronic chr17:57032715(+) A-I      intronic chr17:56999747(+) A-I      intronic chr17:56931050(+) A-I      intronic chr17:56874320(+) A-I      intronic chr17:57023870(+) A-I      intronic chr17:56949132(+) A-I      intronic chr17:56946424(+) A-I      intronic chr17:56851455(+) A-I      intronic chr17:56888406(+) A-I      intronic chr17:56907284(+) A-I      intronic chr17:56919911(+) A-I      intronic chr17:57032646(+) A-I      intronic chr17:56871407(+) A-I      intronic chr17:56861405(+) A-I      intronic chr17:56907287(+) A-I      intronic chr17:56908281(+) A-I      intronic chr17:57030152(+) A-I      intronic chr17:56949538(+) A-I      intronic chr17:56839803(+) A-I      intronic chr17:56945625(+) A-I      intronic chr17:56893712(+) A-I      intronic chr17:56889544(+) A-I      intronic chr17:56841841(+) A-I      intronic chr17:56848432(+) A-I      intronic chr17:56890014(+) A-I      intronic chr17:56865720(+) A-I      intronic chr17:56865966(+) A-I      intronic chr17:56959246(+) A-I      intronic chr17:56866230(+) A-I      intronic chr17:57032118(+) A-I      intronic chr17:56921045(+) A-I      intronic chr17:56912978(+) A-I      intronic chr17:56871404(+) A-I      intronic chr17:56847327(+) A-I      intronic chr17:56872915(+) A-I      intronic chr17:56846927(+) A-I      intronic chr17:56945433(+) A-I      intronic chr17:56971361(+) A-I      intronic chr17:56847178(+) A-I      intronic chr17:56942247(+) A-I      intronic chr17:56872985(+) A-I      intronic chr17:56873571(+) A-I      intronic chr17:56853020(+) A-I      intronic chr17:56871435(+) A-I      intronic chr17:56942981(+) A-I      intronic chr17:56969734(+) A-I      intronic chr17:57055208(+) A-I      intronic chr17:57014897(+) A-I      intronic chr17:56969418(+) A-I      intronic chr17:57001806(+) A-I      intronic chr17:56861631(+) A-I      intronic chr17:56848809(+) A-I      intronic chr17:56873866(+) A-I      intronic chr17:56999147(+) A-I      intronic chr17:56897222(+) A-I      intronic chr17:56965993(+) A-I      intronic chr17:56945665(+) A-I      intronic chr17:56859902(+) A-I      intronic chr17:56921085(+) A-I      intronic chr17:57011285(+) A-I      intronic chr17:56846934(+) A-I      intronic chr17:56945630(+) A-I      intronic chr17:56836555(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PPM1E	chr17:56833385-56833386(+) m6A CDS       25456834//22608085 chr17:56833429-56833430(+) m6A CDS       25456834//22608085 chr17:56833459-56833460(+) m6A CDS       25456834//24981863//22608085 chr17:56833465-56833466(+) m6A CDS       25456834//24981863//22608085 chr17:56833471-56833472(+) m6A CDS       25456834//24981863//22608085 chr17:56833477-56833478(+) m6A CDS       25456834//24981863//22608085 chr17:56833483-56833484(+) m6A CDS       25456834//24981863//22608085 chr17:56833507-56833508(+) m6A CDS       25456834//24981863//22608085 chr17:56833513-56833514(+) m6A CDS       25456834//24981863//22608085 chr17:56833552-56833553(+) m6A CDS       25456834//24981863//22608085 chr17:56833596-56833597(+) m6A CDS       25456834//22608085 chr17:56833608-56833609(+) m6A CDS       25456834//22608085 chr17:57049507-57049508(+) m6A CDS       - chr17:57057448-57057449(+) m6A CDS       22608085 chr17:57057502-57057503(+) m6A CDS       22608085 chr17:57057592-57057593(+) m6A CDS       24209618//25456834//24981863//22608085 chr17:57057598-57057599(+) m6A CDS       24209618//25456834//24981863//22608085 chr17:57057633-57057634(+) m6A CDS       24209618//25456834//24981863//22608085 chr17:57057640-57057641(+) m6A CDS       24209618//25456834//24981863//22608085 chr17:57057780-57057781(+) m6A CDS       25456834//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PPM1E	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: PPM1E

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg