Basic Information:

  VIRBase ID:  

VHID00316712

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART6-3p:  MIMAT0003415          SLC6A3:  NM_001044     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART6-3p	SLC6A3
miRBase Accession/Entrez ID	MIMAT0003415	6531
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DAT//DAT1//PKDYS//PKDYS1

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC6A3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART6-3p
Interactor2: SLC6A3

Evidence Support:

Prediction-Evidence	DIANA-microT//miRanda//PITA//Rep//RNAHybrid
Support Database	RepTar//ViRBase//VmiReg

References:

PMID	20716523	Target region	3'UTR
Source	RepTar//ViRBase//VmiReg	Interactor1 expression	None
Tissue or cell line	C666-1 cells//HEK293T cells//HeLa cells//GM607 cells	Interactor2 expression	None
Description	By contrast, the screening identified 14 human strong candidates for miR-BART6-5p and 3 human targets for miR-BART6-3p regardless of whether miR-BART6-3p RNAs were edited or unedited (supplemental Table 1).